LOCUS BC056401 2812 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, mRNA (cDNA clone IMAGE:5742453), complete cds. ACCESSION BC056401 VERSION BC056401.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2812) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2812) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: g Column: 1 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2812 /db_xref="H-InvDB:HIT000054159" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5742453" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2812 /gene="ARAP1" /db_xref="GeneID:116985" /db_xref="HGNC:HGNC:16925" /db_xref="MIM:606646" CDS 124..2163 /gene="ARAP1" /codon_start=1 /product="ARAP1 protein" /protein_id="AAH56401.1" /db_xref="GeneID:116985" /db_xref="HGNC:HGNC:16925" /db_xref="MIM:606646" /translation="MDASGKGEFSRRWCVLGDGVLSYFENERAVTPNGEIRASEIVCL AVPPPDTHGFEHTFEVYTEGERLYLFGLESAEQAHEWVKCIAKAFVPPLAEDLLARDF ERLGRLPYKAGLSLQRAQEGWFSLSGSELRAVFPEGPCEEPLQLRKLQELSIQGDSEN QVLVLVERRRTLYIQGERRLDFMGWLGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCV DYITQCGLTSEGIYRKCGQTSKTQRLLESLRQDARSVHLKEGEQHVDDVSSALKRFLR DLPDGLFTRAQRLTWLEASEIEDEEEKVSRYRELLVRLPPVNRATVKALISHLYCVQC FSDTNQMNVHNLAIVFGPTLFQTDGQDYKAGRVVEDLINHYVVVFSVDEEELRKQREE ITAIVKMRVAGTASGTQHAGDFICTVYLEEKKAETEQHIKVPASMTAEELTLEILDRR NVGIREKDYWTCFEVNEREEAERPLHFAEKVLPILHGLGTDSHLVVKKHQAMEAMLLY LASRVGDTKHGMMKFREDRSLLGLGLPSGGFHDRYFILNSSCLRLYKEVRSHRPEKEW PIKSLKVYLGVKKKLRPPTCWGFTVVHETEKHEKQQWYLCCDTQMELREWFATFLFVQ HDGLVWPSEPSRMSRAVPEVRLGSVSLIPLRGSENEMRRSVAAFTADPLSLLRNV" BASE COUNT 619 a 762 c 879 g 552 t ORIGIN 1 tgctttccta cggggacaaa gccctccaac tcccaaagag atttctttgg aactccatgc 61 tgttcacaac ctcattgccc cagtccttca gagccattgt agcaggaggc agagtacaga 121 gtgatggatg cttctggaaa aggagagttc agccggcgct ggtgtgtcct tggtgacggg 181 gtcctgagct actttgagaa tgagcgggca gtgaccccca atggagagat tcgggccagc 241 gagattgtgt gcctggcagt gccccctcct gacacccatg gctttgagca cacctttgag 301 gtgtacacgg agggagaacg gctgtacctg tttgggctgg agagtgcgga gcaggctcat 361 gagtgggtca agtgtattgc taaggcattc gtgcctcccc tagccgagga tctgctggcc 421 cgggattttg agcggctggg acgcctaccc tacaaagctg gcctgagcct acagcgggcc 481 caggagggct ggttctctct cagtggctcg gagctccgtg ctgtcttccc ggaggggccc 541 tgcgaagagc cgctgcaact acggaaactg caggagcttt ccatccaggg ggacagtgag 601 aaccaggtgc tggtgctggt ggagcgaagg aggacactgt acatacaggg cgagcggcgg 661 ctggacttca tgggttggct gggggccatc cagaaagcag ccgccagcat gggggacacg 721 ctgtcggagc agcagcttgg ggactcggat atcccggtga tcgtgtaccg ctgtgtggac 781 tacatcacgc agtgcggcct gacctccgag ggcatctacc gcaagtgtgg gcagacatcg 841 aagacacagc ggctgctgga gagcctgcgg caggatgcgc gctctgtgca cctcaaggag 901 ggcgagcagc acgtggatga tgtttcctcg gcgctcaagc gcttcctgcg cgacctgcct 961 gatgggctct tcactcgcgc ccagcgccta acctggctgg aggcctcaga gattgaggac 1021 gaggaggaga aggtctccag gtaccgagag ctgctggtgc ggctgccccc tgtcaaccgg 1081 gccacagtga aggcccttat cagccacctg tactgtgttc agtgcttctc agacacgaac 1141 cagatgaacg tgcacaacct ggcaattgtg tttgggccca cgctcttcca gacagatggg 1201 caggactaca aggctggccg tgtggtggaa gacctcatta accactatgt ggtggtgttt 1261 agtgtggatg aggaagagct caggaagcag cgggaggaga tcactgccat tgtgaagatg 1321 cgcgtggctg gcactgccag tgggacccag catgccggtg acttcatctg cacagtgtat 1381 ctggaagaga agaaggcaga gactgagcag catatcaagg tcccagcatc catgactgct 1441 gaggagctca ccctggagat cctggatcgc cggaacgtgg gcatcaggga gaaggactat 1501 tggacctgct ttgaggtcaa cgagagggag gaggcagagc gccccctgca ctttgcggag 1561 aaggtgctgc ccatcctgca cgggctgggc acggacagcc acctggtggt gaagaagcac 1621 caggccatgg aggccatgct gctgtacctg gccagccgtg tcggtgacac caagcatggc 1681 atgatgaagt tccgtgagga ccgcagcctc ctgggcctgg gcctgccctc aggtggcttc 1741 cacgatcgct acttcatcct caacagcagc tgcttgcggc tctacaagga ggtccggagt 1801 caccggcctg agaaggagtg gcctattaag agtctcaaag tctacctggg agtgaagaag 1861 aaactcaggc cacccacctg ctggggcttc acagtggtgc atgagacaga gaaacatgag 1921 aagcagcagt ggtacctctg ctgtgacaca cagatggagc tccgggagtg gttcgctacc 1981 tttctgtttg tgcagcatga cggcctggtg tggccctcag agccctcacg catgtcccgg 2041 gcagtgcctg aggtccggct gggtagtgtg tcactgatcc cccttcgagg tagtgaaaat 2101 gaaatgcgcc ggagtgtggc tgccttcacc gcggaccctc tgtctcttct gcgcaacgtc 2161 tgagcacagg agcccatcct tggctctagg attccgccgc tggaagcctt ctgttcagac 2221 accccttatg ctccaaggcc tgatgtgagc cagcgggggg tgcatgggaa actgcacccc 2281 acaacccaca tcctccatcc tgactgcagc atggggttcc ccggcagggg tgggaggcag 2341 caggggtcag cctgggcagg aacctctccc aactctgtcc aggtgttcag acctcttggc 2401 ccaacctgct caccccaccg ggttcactgt ccttgtgggg ctggagagat gggcataagt 2461 caggaacttg ggaggaccac caccctttca gaggcgtgag gccctggggc cctgccggaa 2521 gggagccccc tgctcctccc aacaaactcc agaacagcag aaagcgggtg ctgtagagga 2581 gcactcagct cacggggagg gagctcttgg ctgagcttct acagggctga gagctgcgct 2641 ttggggactt cagccttcct tccagtctgg gctgagtggg gggtccagac tacctgatgc 2701 cccttcccca atttggggac tttttgataa tataaatata tctgtatatt ttaccctaaa 2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //