LOCUS BC056401 2812 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH
domain 1, mRNA (cDNA clone IMAGE:5742453), complete cds.
ACCESSION BC056401
VERSION BC056401.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: g Column: 1
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2812
/db_xref="H-InvDB:HIT000054159"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5742453"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2812
/gene="ARAP1"
/db_xref="GeneID:116985"
/db_xref="HGNC:HGNC:16925"
/db_xref="MIM:606646"
CDS 124..2163
/gene="ARAP1"
/codon_start=1
/product="ARAP1 protein"
/protein_id="AAH56401.1"
/db_xref="GeneID:116985"
/db_xref="HGNC:HGNC:16925"
/db_xref="MIM:606646"
/translation="MDASGKGEFSRRWCVLGDGVLSYFENERAVTPNGEIRASEIVCL
AVPPPDTHGFEHTFEVYTEGERLYLFGLESAEQAHEWVKCIAKAFVPPLAEDLLARDF
ERLGRLPYKAGLSLQRAQEGWFSLSGSELRAVFPEGPCEEPLQLRKLQELSIQGDSEN
QVLVLVERRRTLYIQGERRLDFMGWLGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCV
DYITQCGLTSEGIYRKCGQTSKTQRLLESLRQDARSVHLKEGEQHVDDVSSALKRFLR
DLPDGLFTRAQRLTWLEASEIEDEEEKVSRYRELLVRLPPVNRATVKALISHLYCVQC
FSDTNQMNVHNLAIVFGPTLFQTDGQDYKAGRVVEDLINHYVVVFSVDEEELRKQREE
ITAIVKMRVAGTASGTQHAGDFICTVYLEEKKAETEQHIKVPASMTAEELTLEILDRR
NVGIREKDYWTCFEVNEREEAERPLHFAEKVLPILHGLGTDSHLVVKKHQAMEAMLLY
LASRVGDTKHGMMKFREDRSLLGLGLPSGGFHDRYFILNSSCLRLYKEVRSHRPEKEW
PIKSLKVYLGVKKKLRPPTCWGFTVVHETEKHEKQQWYLCCDTQMELREWFATFLFVQ
HDGLVWPSEPSRMSRAVPEVRLGSVSLIPLRGSENEMRRSVAAFTADPLSLLRNV"
BASE COUNT 619 a 762 c 879 g 552 t
ORIGIN
1 tgctttccta cggggacaaa gccctccaac tcccaaagag atttctttgg aactccatgc
61 tgttcacaac ctcattgccc cagtccttca gagccattgt agcaggaggc agagtacaga
121 gtgatggatg cttctggaaa aggagagttc agccggcgct ggtgtgtcct tggtgacggg
181 gtcctgagct actttgagaa tgagcgggca gtgaccccca atggagagat tcgggccagc
241 gagattgtgt gcctggcagt gccccctcct gacacccatg gctttgagca cacctttgag
301 gtgtacacgg agggagaacg gctgtacctg tttgggctgg agagtgcgga gcaggctcat
361 gagtgggtca agtgtattgc taaggcattc gtgcctcccc tagccgagga tctgctggcc
421 cgggattttg agcggctggg acgcctaccc tacaaagctg gcctgagcct acagcgggcc
481 caggagggct ggttctctct cagtggctcg gagctccgtg ctgtcttccc ggaggggccc
541 tgcgaagagc cgctgcaact acggaaactg caggagcttt ccatccaggg ggacagtgag
601 aaccaggtgc tggtgctggt ggagcgaagg aggacactgt acatacaggg cgagcggcgg
661 ctggacttca tgggttggct gggggccatc cagaaagcag ccgccagcat gggggacacg
721 ctgtcggagc agcagcttgg ggactcggat atcccggtga tcgtgtaccg ctgtgtggac
781 tacatcacgc agtgcggcct gacctccgag ggcatctacc gcaagtgtgg gcagacatcg
841 aagacacagc ggctgctgga gagcctgcgg caggatgcgc gctctgtgca cctcaaggag
901 ggcgagcagc acgtggatga tgtttcctcg gcgctcaagc gcttcctgcg cgacctgcct
961 gatgggctct tcactcgcgc ccagcgccta acctggctgg aggcctcaga gattgaggac
1021 gaggaggaga aggtctccag gtaccgagag ctgctggtgc ggctgccccc tgtcaaccgg
1081 gccacagtga aggcccttat cagccacctg tactgtgttc agtgcttctc agacacgaac
1141 cagatgaacg tgcacaacct ggcaattgtg tttgggccca cgctcttcca gacagatggg
1201 caggactaca aggctggccg tgtggtggaa gacctcatta accactatgt ggtggtgttt
1261 agtgtggatg aggaagagct caggaagcag cgggaggaga tcactgccat tgtgaagatg
1321 cgcgtggctg gcactgccag tgggacccag catgccggtg acttcatctg cacagtgtat
1381 ctggaagaga agaaggcaga gactgagcag catatcaagg tcccagcatc catgactgct
1441 gaggagctca ccctggagat cctggatcgc cggaacgtgg gcatcaggga gaaggactat
1501 tggacctgct ttgaggtcaa cgagagggag gaggcagagc gccccctgca ctttgcggag
1561 aaggtgctgc ccatcctgca cgggctgggc acggacagcc acctggtggt gaagaagcac
1621 caggccatgg aggccatgct gctgtacctg gccagccgtg tcggtgacac caagcatggc
1681 atgatgaagt tccgtgagga ccgcagcctc ctgggcctgg gcctgccctc aggtggcttc
1741 cacgatcgct acttcatcct caacagcagc tgcttgcggc tctacaagga ggtccggagt
1801 caccggcctg agaaggagtg gcctattaag agtctcaaag tctacctggg agtgaagaag
1861 aaactcaggc cacccacctg ctggggcttc acagtggtgc atgagacaga gaaacatgag
1921 aagcagcagt ggtacctctg ctgtgacaca cagatggagc tccgggagtg gttcgctacc
1981 tttctgtttg tgcagcatga cggcctggtg tggccctcag agccctcacg catgtcccgg
2041 gcagtgcctg aggtccggct gggtagtgtg tcactgatcc cccttcgagg tagtgaaaat
2101 gaaatgcgcc ggagtgtggc tgccttcacc gcggaccctc tgtctcttct gcgcaacgtc
2161 tgagcacagg agcccatcct tggctctagg attccgccgc tggaagcctt ctgttcagac
2221 accccttatg ctccaaggcc tgatgtgagc cagcgggggg tgcatgggaa actgcacccc
2281 acaacccaca tcctccatcc tgactgcagc atggggttcc ccggcagggg tgggaggcag
2341 caggggtcag cctgggcagg aacctctccc aactctgtcc aggtgttcag acctcttggc
2401 ccaacctgct caccccaccg ggttcactgt ccttgtgggg ctggagagat gggcataagt
2461 caggaacttg ggaggaccac caccctttca gaggcgtgag gccctggggc cctgccggaa
2521 gggagccccc tgctcctccc aacaaactcc agaacagcag aaagcgggtg ctgtagagga
2581 gcactcagct cacggggagg gagctcttgg ctgagcttct acagggctga gagctgcgct
2641 ttggggactt cagccttcct tccagtctgg gctgagtggg gggtccagac tacctgatgc
2701 cccttcccca atttggggac tttttgataa tataaatata tctgtatatt ttaccctaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//