LOCUS BC054860 754 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens chromodomain helicase DNA binding protein 1, mRNA (cDNA clone IMAGE:6617223), partial cds. ACCESSION BC054860 VERSION BC054860.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 754) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 754) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (03-JUL-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 48 Row: k Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557446. FEATURES Location/Qualifiers source 1..754 /db_xref="H-InvDB:HIT000259462" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6617223" /tissue_type="Testis" /clone_lib="NIH_MGC_82" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..>754 /gene="CHD1" /db_xref="GeneID:1105" /db_xref="MIM:602118" CDS 132..>754 /gene="CHD1" /codon_start=1 /product="CHD1 protein" /protein_id="AAH54860.1" /db_xref="GeneID:1105" /db_xref="MIM:602118" /translation="MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSS SQSGSSDSDSGSESGSQSGSESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAIL KKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQS GSDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRSKSKKKKKKKK" BASE COUNT 279 a 126 c 172 g 177 t ORIGIN 1 gggagaaaac ctgtgactgt tgaagaaaat tcatctgtga atttttatat tcaaggagtc 61 agtatttata ttcatctttt aaactgggaa gatttatatt ttactttaaa acttcttgat 121 aataatttac aatgaatgga cacagtgatg aagaaagtgt tagaaacagt agtggagaat 181 caagccagtc ggatgatgat tctgggtcag cttcaggctc tggatctggt tcgagttctg 241 gaagcagtag tgatggaagc agtagccagt caggtagcag tgactctgac tccggatctg 301 aatcaggcag tcagtcaggg tctgagtcag acacttcccg agaaaacaaa gttcaagcaa 361 aaccaccgaa agttgatgga gctgagtttt ggaaatctag tcctagtatt ctggccgttc 421 agagatctgc aatcctcaag aagcagcaac agcagcagca gcaacaacaa catcaagcct 481 catctaatag cggatcagaa gaggattcct ctagcagtga agattccgat gactcatcaa 541 gtgaggtcaa aaggaaaaag cataaagatg aagattggca aatgtctggg tcaggatctc 601 catctcagtc tggttcagat tcagaatctg aagaagagag agagaaaagc agttgtgatg 661 aaacagaatc tgattatgag ccaaaaaaca aagtcaaaag cagaaaacct caaaatagat 721 ctaagtcgaa aaaaaaaaaa aaaaaaaaaa aaaa //