LOCUS BC054860 754 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens chromodomain helicase DNA binding protein 1, mRNA
(cDNA clone IMAGE:6617223), partial cds.
ACCESSION BC054860
VERSION BC054860.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 754)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 754)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: k Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557446.
FEATURES Location/Qualifiers
source 1..754
/db_xref="H-InvDB:HIT000259462"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6617223"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>754
/gene="CHD1"
/db_xref="GeneID:1105"
/db_xref="MIM:602118"
CDS 132..>754
/gene="CHD1"
/codon_start=1
/product="CHD1 protein"
/protein_id="AAH54860.1"
/db_xref="GeneID:1105"
/db_xref="MIM:602118"
/translation="MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSS
SQSGSSDSDSGSESGSQSGSESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAIL
KKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQS
GSDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRSKSKKKKKKKK"
BASE COUNT 279 a 126 c 172 g 177 t
ORIGIN
1 gggagaaaac ctgtgactgt tgaagaaaat tcatctgtga atttttatat tcaaggagtc
61 agtatttata ttcatctttt aaactgggaa gatttatatt ttactttaaa acttcttgat
121 aataatttac aatgaatgga cacagtgatg aagaaagtgt tagaaacagt agtggagaat
181 caagccagtc ggatgatgat tctgggtcag cttcaggctc tggatctggt tcgagttctg
241 gaagcagtag tgatggaagc agtagccagt caggtagcag tgactctgac tccggatctg
301 aatcaggcag tcagtcaggg tctgagtcag acacttcccg agaaaacaaa gttcaagcaa
361 aaccaccgaa agttgatgga gctgagtttt ggaaatctag tcctagtatt ctggccgttc
421 agagatctgc aatcctcaag aagcagcaac agcagcagca gcaacaacaa catcaagcct
481 catctaatag cggatcagaa gaggattcct ctagcagtga agattccgat gactcatcaa
541 gtgaggtcaa aaggaaaaag cataaagatg aagattggca aatgtctggg tcaggatctc
601 catctcagtc tggttcagat tcagaatctg aagaagagag agagaaaagc agttgtgatg
661 aaacagaatc tgattatgag ccaaaaaaca aagtcaaaag cagaaaacct caaaatagat
721 ctaagtcgaa aaaaaaaaaa aaaaaaaaaa aaaa
//