LOCUS BC054345 3561 bp mRNA linear HUM 19-MAR-2007 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 3, mRNA (cDNA clone MGC:61446 IMAGE:6501674), complete cds. ACCESSION BC054345 VERSION BC054345.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3561) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3561) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: p Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9506400. FEATURES Location/Qualifiers source 1..3561 /db_xref="H-InvDB:HIT000259437" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:61446 IMAGE:6501674" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3561 /gene="ARHGEF3" /gene_synonym="DKFZP434F2429" /gene_synonym="GEF3" /gene_synonym="STA3" /gene_synonym="XPLN" /db_xref="GeneID:50650" /db_xref="HGNC:HGNC:683" CDS 118..1698 /gene="ARHGEF3" /gene_synonym="DKFZP434F2429" /gene_synonym="GEF3" /gene_synonym="STA3" /gene_synonym="XPLN" /codon_start=1 /product="Rho guanine nucleotide exchange factor (GEF) 3" /protein_id="AAH54345.2" /db_xref="GeneID:50650" /db_xref="HGNC:HGNC:683" /translation="MVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSR VTSLANLIPPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSK LWSETFDVCVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTE QELNQIFGTLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQ VAAKALLDHKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRH TPNDNPDQQHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRV LCCHGELKNNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDG EVRLGGSLRGAFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKET VLCAAGQAGVLDSEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCER MEQTDSSCGNSRHGESNV" BASE COUNT 1041 a 787 c 817 g 916 t ORIGIN 1 gtctccgtgt cgccgccgcc gcccggcatc gtggagctgg ggcccccttt tgcctgggag 61 ttttgtagtc gcctagggtc agcggtgaca tcccaaaggg caggcccggc agccgccatg 121 gtggccaagg attacccctt ctacctcacg gtcaagagag cgaactgcag cctggagcta 181 cccccggcca gcggtccggc caaggacgct gaggagccta gtaataaacg ggtcaaaccc 241 ctttcccgag tcacgtcgct agcaaacctc atcccgcccg tgaaggccac gccattaaag 301 cgcttcagtc aaaccctgca gcgctccatt agcttccgca gtgagagccg ccctgacatc 361 ctcgcccccc gaccctggtc cagaaatgcc gccccctcga gcacgaaacg gagagatagc 421 aagctgtgga gtgagacctt cgatgtgtgc gtcaatcaga tgcttacatc caaggaaatc 481 aaacgtcagg aggcgatctt tgagctttcc caaggagaag aagacttgat agaagacttg 541 aaattagcaa aaaaggccta tcatgacccc atgctgaaac tctccataat gacagaacaa 601 gagttgaatc aaatttttgg aacactggac tctctaattc ctctacatga agagctcctt 661 agtcagcttc gagatgttag gaagcctgat ggctcgactg aacatgttgg tcccatcctc 721 gtgggctggc tcccttgcct cagctcctat gatagctact gcagcaatca agtagccgcc 781 aaagctctgc tggaccacaa aaagcaagat caccgagtcc aggatttcct acagcgatgt 841 ttagaatccc cctttagccg caaactagat ctctggaatt tcctcgatat tccaagaagc 901 cgcctggtaa aataccctct gcttctccga gaaatcttga ggcacacacc aaatgataat 961 ccagatcagc agcacttgga agaagctata aatatcattc agggaattgt ggcagaaatc 1021 aacaccaaga ctggtgaatc tgaatgccgc tattataaag agcggcttct ttacttggaa 1081 gaaggccaga aagactccct gatcgacagc tctcgagtct tgtgttgtca tggtgaactg 1141 aagaacaatc ggggcgtgaa actgcatgtt ttcctgttcc aagaagtgct tgtgatcact 1201 cgagccgtca cccacaatga gcagctttgc taccagctgt accgtcagcc aatccccgtg 1261 aaagacctcc tgctggaaga cctccaggat ggagaagtga ggctgggtgg ctccctgcga 1321 ggggcattca gcaacaatga gagaattaaa aacttcttca gagtcagttt caaaaatgga 1381 tcccaaagtc agacccactc gctacaagcc aatgacactt tcaacaaaca gcagtggctt 1441 aactgtattc gtcaagccaa agaaacagtt ttgtgtgctg ccgggcaagc tggggtgctt 1501 gactccgagg gatcgttcct aaatcccacc accgggagca gagagctaca gggagaaaca 1561 aaacttgagc agatggacca atcggacagt gagtcagact gtagtatgga cacgagtgag 1621 gtcagcctcg actgtgagcg catggaacag acagactctt cctgtggaaa cagcaggcac 1681 ggtgaaagta acgtctgaca gaagcatgtg cacttcggga agcaggcctg catcttacct 1741 gtacagtatt tgcattccac agatggaacg gtttggagaa gcactttttc atacttttgt 1801 gaaagtatac atgttggccc agtctctcgt atctgtacct ttgtccctag tactgtaact 1861 gccaatctgt ctgtgtaagc tggaatctgt ggcaactatt accctgtgtt gtatttccca 1921 agtgtctgga tggatggaga ggtactcaaa caagttactt tcagttgtcc tgctggattt 1981 taaaaaaata gaaaaagaat ctcaaaacta ctgttttaca tagattgttt gaagagtcct 2041 tcctcttgtg cttctgtacc actttcccag ctcttagatg tggtagctaa aggcacggaa 2101 tttagacggc cttgtaaata gggcatgagg aactcatctg tgtattggga tggtattaga 2161 gagagaatca ggaaagacca actcatgaag tgaacttggt ttgatcttac tcaactagaa 2221 agcttgaaaa catccctggg gattctgaag gcttaatttt gcaaaggagg atgcattgtc 2281 tgaactttgc aacttcatcc agtgcaagtt tgatgcaaga atgtattagg acataaaata 2341 gaggctgacc ttaaaagggc caggacagaa gcggctgcca gctctgaatc tttaactgaa 2401 atgcacatgg caccaggagg tgtctctcat agttggttgc tagcctaaaa catcagaata 2461 gaacccaaag ggcttaggaa ggcctgccag gataacaaga aggccctgta ttcattgtgt 2521 ttcatctgcc taggcctact cattatttta gagaatgaat gaagcaacaa ggaagagaga 2581 ccatgactct atcgatgaca ctgtttatag aaacacagga gaggaagaat ttggaatgaa 2641 aagcacttcg tcagaacctt ctgtgggagc cattgagaga aaagcatggt ccagtgcctt 2701 ctgagaaagg ccagagcttt gggctttcct gctctgcttt tgggtcgtca atttgccatc 2761 tctggttctg tgctataatc agaattgtaa ttatgttctc cagaggccaa tttcattaac 2821 tctgattaat tagaatcagc tagccagatt agtaacctct ttgtccagcc ttgatttaca 2881 gtgcagggta aagtgcagac cttaaaaaca gctaagtacc tagaagagct ccctgcaagt 2941 gtaaatatta aggatgacct gtgcaaaatt atacccacac cagcactagt ggtaattatt 3001 ctaaattatt gccaaaaagt ttttttaatc tgtctttcaa gtttacagaa aagaaagcag 3061 taaatgcatt gatgtcattt tattatgtac atatatcatg tgcattcaag ctgtgtgaca 3121 agatatatca atataaaaac aaggtatata ctttattatt ttttgaaaac aaggatattg 3181 tgatcaattt taccctgtaa aacatatttc tgtatttata ggtcttaaac atgatgaatt 3241 ttttctatta caagtttatt taaaactgct ttctcaagtc gttattgata cagcaagtga 3301 acctgctgca gacagaagca gaggaaagcc aagaacagcc tttattggtg aagaaaagaa 3361 tgaatgattc tttgtaggcg ccatcagcca cttttagaag ccatcagcca gtgtgttggg 3421 aaaagaggtt tgtcaagtgt tggcctatgg gaaggtggtc aatgaatgtt ttgatgaaat 3481 gaatgttttt gtataatggc cttaaacttt tctggaagta tttcaaataa attacattat 3541 taagtcaaaa aaaaaaaaaa a //