LOCUS       BC053859                1408 bp    mRNA    linear   HUM 28-JUL-2005
DEFINITION  Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic
            polypeptide-like 3B, mRNA (cDNA clone MGC:61606 IMAGE:6174285),
            complete cds.
ACCESSION   BC053859
VERSION     BC053859.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1408)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 115 Row: n Column: 3
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22907024.
FEATURES             Location/Qualifiers
     source          1..1408
                     /db_xref="H-InvDB:HIT000053997"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:61606 IMAGE:6174285"
                     /tissue_type="Uterus, leiomyosarcoma"
                     /clone_lib="NIH_MGC_71"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1408
                     /gene="APOBEC3B"
                     /gene_synonym="APOBEC1L"
                     /gene_synonym="ARCD3"
                     /gene_synonym="ARP4"
                     /gene_synonym="DJ742C19.2"
                     /gene_synonym="FLJ21201"
                     /gene_synonym="PHRBNL"
                     /db_xref="GeneID:9582"
                     /db_xref="MIM:607110"
     CDS             82..837
                     /gene="APOBEC3B"
                     /gene_synonym="APOBEC1L"
                     /gene_synonym="ARCD3"
                     /gene_synonym="ARP4"
                     /gene_synonym="DJ742C19.2"
                     /gene_synonym="FLJ21201"
                     /gene_synonym="PHRBNL"
                     /codon_start=1
                     /product="APOBEC3B protein"
                     /protein_id="AAH53859.1"
                     /db_xref="GeneID:9582"
                     /db_xref="MIM:607110"
                     /translation="MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRG
                     RSNLLWDTGVFRGQVYFEPQYHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVA
                     KLAEFLSEHPNVTLTISAARLYYYWERDYRRALCRLSQAGARVKIMDYEEFAYCWENF
                     VYNEGQQFMPWYKFDENYAFLHRTLKEILRLRIFSVAFTAAMRSCASWTWFLLCSWTR
                     PRSTGSLGSSPGAPASPGAVPGKCVRSFRRTHT"
BASE COUNT          380 a          344 c          341 g          343 t
ORIGIN      
        1 gactagttct agatcgcgat ctagaactag tagcttcaaa aaaagagcgg gacagggaca
       61 agcgtatcta agaggctgaa catgaatcca cagatcagaa atccgatgga gcggatgtat
      121 cgagacacat tctacgacaa ctttgaaaac gaacccatcc tctatggtcg gagctacact
      181 tggctgtgct atgaagtgaa aataaagagg ggccgctcaa atctcctttg ggacacaggg
      241 gtctttcgag gccaggtgta tttcgagcct cagtaccacg cagaaatgtg cttcctctct
      301 tggttctgtg gcaaccagct gcctgcttac aagtgtttcc agatcacctg gtttgtatcc
      361 tggaccccct gcccggactg tgtggcgaag ctggccgaat tcctgtctga gcaccccaat
      421 gtcaccctga ccatctccgc cgcccgcctc tactactact gggaaagaga ttaccgaagg
      481 gcgctctgca ggctgagtca ggcaggagcc cgcgtgaaga tcatggacta tgaagaattt
      541 gcatactgct gggaaaactt tgtgtacaat gaaggtcagc aattcatgcc ttggtacaaa
      601 ttcgatgaaa attatgcatt cctgcaccgc acgctaaagg agattctcag gctaagaatc
      661 ttctctgtgg cttttacggc cgccatgcgg agctgcgctt cttggacctg gttccttctt
      721 tgcagttgga cccggcccag atctacaggg tcacttggtt catctcctgg agcccctgct
      781 tctcctgggg ctgtgccggg gaagtgcgtg cgttccttca ggagaacaca cacgtgagac
      841 tgcgcatctt cgctgcccgc atctatgatt atgaccccct atataaggag gcgctgcaaa
      901 tgctgcggga tgctggggcc caagtctcca tcatgaccta cgatgagttt gagtactgct
      961 gggacacctt tgtgtaccgc cagggatgtc ccttccagcc ctgggatgga ctagaggagc
     1021 acagccaagc cctgagtggg aggctgcggg ccattctcca gaatcaggga aactgaagga
     1081 tgggcctcag tctctaagga aggcagagac ctgggttgag cagcagaata aaagatcttc
     1141 ttccaagaaa tgcaaacaga ccgttcacca ccatctccag ctgctcacag acaccagcaa
     1201 agcaatgtgc tcctgatcaa gtagattttt taaaaatcag agtcaattaa ttttaattga
     1261 aaatttctct tatgttccaa gtgtacaaga gtaagattat gctcaatatt cccagaatag
     1321 ttttcaatgt attaatgaag tgattaattg gctccatatt tagactaata aaacattaag
     1381 aatcttccat aaaaaaaaaa aaaaaaaa
//