LOCUS BC053596 2800 bp mRNA linear HUM 07-AUG-2007 DEFINITION Homo sapiens ATG2 autophagy related 2 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:5730491), partial cds. ACCESSION BC053596 VERSION BC053596.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2800) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2800) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: g Column: 14. FEATURES Location/Qualifiers source 1..2800 /db_xref="H-InvDB:HIT000259303" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5730491" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_124" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2800 /gene="ATG2A" /db_xref="GeneID:23130" /db_xref="HGNC:HGNC:29028" CDS <1..2260 /gene="ATG2A" /codon_start=2 /product="ATG2A protein" /protein_id="AAH53596.1" /db_xref="GeneID:23130" /db_xref="HGNC:HGNC:29028" /translation="LELVIKTWKGSTEGKLSQPLFELRCSNNVVHVHSCADSCALLVN LLQYVMSTGDLHPPPRPPSPTEIAGQKVQLSESPASLPSCPPVETALINQRDLADALL DTERSLRELAQPSGGHLPQASPISVYLFPGERSGAPPPSPPVGGPAGSLGSCSEEKED EREEEGDGDTLDSDEFCILDAPGLGIPPRDGEPVVTQLHPGPIVVRDGYFSRPIGSTD LLRAPAHFPVPSTRVVLREVSLVWHLYGGRDFGPHPGHRARTGLSGPRSSPSRCSGPN RPQNSWRTQGGSGRQHHVLMEIQLSKVSFQHEVYPAEPATGPAAPSQELEERPLSRQV FIVQELEVRDRLASSQINKFLYLHTSERMPRRAHSNMLTIKALHVAPTTNLGGPECCL RVSLMPLRLNVDQDALFFLKDFFTSLVAGINPVVPGETSAEARPETRAQPSSPLEGQA EGVETTGSQEAPGGGHSPSPPDQQPIYFREFRFTSEVPIWLDYHGKHVTMDQVGTFAG LLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMH SVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQA TAETVYDILSPAAPVSRSLQDKRSARRLRRGQQPADLREGVAKAYDTVREGILDTAQT ICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQIVPDAHKD HALKWRSDSAQD" BASE COUNT 588 a 921 c 818 g 473 t ORIGIN 1 cttggaactt gtgattaaaa cctggaaagg gagcaccgag ggcaaactga gccagccact 61 attcgagctg cgctgctcca acaatgtggt acacgtgcac agctgtgccg actcctgtgc 121 cctgctggtc aacctgctcc agtacgtaat gagcacaggc gatctgcacc ccccaccccg 181 gccccccagc cccacggaga tcgccggcca gaaggtacag ctctcggaga gtcctgcctc 241 tctgccctcg tgccccccag tggagacggc cctcatcaac cagcgtgacc tggccgacgc 301 cctcctggac accgagcgca gcctacggga gctggcccag ccttcaggtg gccacctccc 361 tcaggcgtcg cccatctccg tctacctatt cccaggtgaa cggagtgggg ccccaccccc 421 ttcaccacct gtcgggggcc ctgctggcag cttagggtca tgctcagagg agaaggaaga 481 tgaaagggaa gaggagggcg atggagacac cctggacagt gatgagttct gcatccttga 541 tgctcccggc ctgggcatcc cgccccgaga tggggagcct gtggtgacac agctgcatcc 601 cggccccatc gttgtgaggg acggttactt ctcacggccg atcggcagca cggacttgct 661 gcgggcacct gcccatttcc cagtgcccag cactcgggtg gtgctacgtg aggtctccct 721 cgtctggcac ctctatgggg gccgagactt tggcccccac cccggccaca gggcaagaac 781 tggcctctca ggtcccagga gctccccttc ccgctgctct ggccccaacc ggccccagaa 841 ctcatggcgc acgcaggggg gcagcgggcg gcagcaccat gtcctcatgg agatccagct 901 gagcaaggta agcttccagc acgaggtgta cccagcggag ccagccacag gccctgcggc 961 ccccagccag gagctggagg agcgaccgct gtcccgtcag gtgttcatcg tgcaggagct 1021 ggaggtccga gaccggctcg cctcctccca gatcaacaag ttcctgtacc tacacacgag 1081 tgagcggatg ccgcgacgtg cccactctaa catgctcacc atcaaagcgc tgcatgtggc 1141 ccccactacc aacctgggtg ggcctgagtg ctgtctccgc gtctcgctga tgcccctgcg 1201 gctcaatgtg gaccaggatg ccctcttctt cctcaaggac ttcttcacta gtctggtggc 1261 cggcatcaac cccgtggtcc caggggagac ctccgctgag gctcgccccg agactcgagc 1321 ccagcccagc agccccctgg aagggcaggc cgaaggcgta gagaccactg gttcgcagga 1381 ggccccagga ggtggacaca gcccctcccc tcctgaccag cagcccatct acttcagaga 1441 gttccgcttc acgtctgagg tccccatctg gctggattac catggcaagc acgtcacgat 1501 ggaccaggtg ggcacttttg ctggcctcct catcggcctg gcccaactca actgctccga 1561 gctgaagcta aagcggctct gttgcaggca cgggctcctg ggtgtggaca aggtgctggg 1621 ctatgccctc aacgagtggc tgcaggacat ccgcaagaac cagctgcccg gcctgctggg 1681 aggcgtgggc cccatgcact cggttgtcca gctcttccaa gggttccggg acctgctgtg 1741 gctgcccatt gagcagtaca ggaaggatgg ccgcctcatg cgggggctgc agcgaggggc 1801 tgcctccttt ggctcatcca cagcctctgc cgccctggaa ctcagcaacc ggttggtaca 1861 ggctatccag gccacagctg agaccgtgta tgacatcctg tccccggcag cccccgtctc 1921 ccgctccctg caggataagc gctctgcgcg gaggctgcgc aggggccagc agcctgccga 1981 cctgcgggag ggtgtggcca aggcctacga cacagtgcga gagggcatct tggatacagc 2041 tcagaccatc tgtgacgtgg catcgcgggg ccatgagcag aaggggctga cgggcgccgt 2101 ggggggcgtg atccgccagc tgcccccgac tgtggtgaag ccgctcatcc tggccacgga 2161 ggccacgtcc agcctgctcg ggggcatgcg caaccagatt gtccccgacg cccacaagga 2221 ccacgccctc aagtggcgct cggacagtgc ccaagactga gcctggggtg cccggcaccc 2281 agagggtgct gcccaccatg ctcctgagcc tcccaagagc tgcagcccac gggcccggcc 2341 cggcctggcc cttcagggga tggccactgt gaaggacgcc ttcccagcct gcccgttgcc 2401 aatctgctgt gagagggggg cctccctgcc ttggggcctt agccctggct ctgcactttt 2461 cctccgggga gaaaggacac tgcccctccc ccgacctggg cccacactgc tgccttctcc 2521 caggacggag gcttttggac cctcggaccc catcccactc agccaagtgt ctttctgtgt 2581 ctggggggag gaggggatga tatccgtgtg gttcgatgta ttatttttaa gctccgtgag 2641 tgcgtgggtc agtgtctgca tgaagtggaa taaactgccc accgccaaaa aaaaaaaaaa 2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //