LOCUS BC053596 2800 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens ATG2 autophagy related 2 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:5730491), partial cds.
ACCESSION BC053596
VERSION BC053596.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2800)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: g Column: 14.
FEATURES Location/Qualifiers
source 1..2800
/db_xref="H-InvDB:HIT000259303"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5730491"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2800
/gene="ATG2A"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
CDS <1..2260
/gene="ATG2A"
/codon_start=2
/product="ATG2A protein"
/protein_id="AAH53596.1"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
/translation="LELVIKTWKGSTEGKLSQPLFELRCSNNVVHVHSCADSCALLVN
LLQYVMSTGDLHPPPRPPSPTEIAGQKVQLSESPASLPSCPPVETALINQRDLADALL
DTERSLRELAQPSGGHLPQASPISVYLFPGERSGAPPPSPPVGGPAGSLGSCSEEKED
EREEEGDGDTLDSDEFCILDAPGLGIPPRDGEPVVTQLHPGPIVVRDGYFSRPIGSTD
LLRAPAHFPVPSTRVVLREVSLVWHLYGGRDFGPHPGHRARTGLSGPRSSPSRCSGPN
RPQNSWRTQGGSGRQHHVLMEIQLSKVSFQHEVYPAEPATGPAAPSQELEERPLSRQV
FIVQELEVRDRLASSQINKFLYLHTSERMPRRAHSNMLTIKALHVAPTTNLGGPECCL
RVSLMPLRLNVDQDALFFLKDFFTSLVAGINPVVPGETSAEARPETRAQPSSPLEGQA
EGVETTGSQEAPGGGHSPSPPDQQPIYFREFRFTSEVPIWLDYHGKHVTMDQVGTFAG
LLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMH
SVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQA
TAETVYDILSPAAPVSRSLQDKRSARRLRRGQQPADLREGVAKAYDTVREGILDTAQT
ICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQIVPDAHKD
HALKWRSDSAQD"
BASE COUNT 588 a 921 c 818 g 473 t
ORIGIN
1 cttggaactt gtgattaaaa cctggaaagg gagcaccgag ggcaaactga gccagccact
61 attcgagctg cgctgctcca acaatgtggt acacgtgcac agctgtgccg actcctgtgc
121 cctgctggtc aacctgctcc agtacgtaat gagcacaggc gatctgcacc ccccaccccg
181 gccccccagc cccacggaga tcgccggcca gaaggtacag ctctcggaga gtcctgcctc
241 tctgccctcg tgccccccag tggagacggc cctcatcaac cagcgtgacc tggccgacgc
301 cctcctggac accgagcgca gcctacggga gctggcccag ccttcaggtg gccacctccc
361 tcaggcgtcg cccatctccg tctacctatt cccaggtgaa cggagtgggg ccccaccccc
421 ttcaccacct gtcgggggcc ctgctggcag cttagggtca tgctcagagg agaaggaaga
481 tgaaagggaa gaggagggcg atggagacac cctggacagt gatgagttct gcatccttga
541 tgctcccggc ctgggcatcc cgccccgaga tggggagcct gtggtgacac agctgcatcc
601 cggccccatc gttgtgaggg acggttactt ctcacggccg atcggcagca cggacttgct
661 gcgggcacct gcccatttcc cagtgcccag cactcgggtg gtgctacgtg aggtctccct
721 cgtctggcac ctctatgggg gccgagactt tggcccccac cccggccaca gggcaagaac
781 tggcctctca ggtcccagga gctccccttc ccgctgctct ggccccaacc ggccccagaa
841 ctcatggcgc acgcaggggg gcagcgggcg gcagcaccat gtcctcatgg agatccagct
901 gagcaaggta agcttccagc acgaggtgta cccagcggag ccagccacag gccctgcggc
961 ccccagccag gagctggagg agcgaccgct gtcccgtcag gtgttcatcg tgcaggagct
1021 ggaggtccga gaccggctcg cctcctccca gatcaacaag ttcctgtacc tacacacgag
1081 tgagcggatg ccgcgacgtg cccactctaa catgctcacc atcaaagcgc tgcatgtggc
1141 ccccactacc aacctgggtg ggcctgagtg ctgtctccgc gtctcgctga tgcccctgcg
1201 gctcaatgtg gaccaggatg ccctcttctt cctcaaggac ttcttcacta gtctggtggc
1261 cggcatcaac cccgtggtcc caggggagac ctccgctgag gctcgccccg agactcgagc
1321 ccagcccagc agccccctgg aagggcaggc cgaaggcgta gagaccactg gttcgcagga
1381 ggccccagga ggtggacaca gcccctcccc tcctgaccag cagcccatct acttcagaga
1441 gttccgcttc acgtctgagg tccccatctg gctggattac catggcaagc acgtcacgat
1501 ggaccaggtg ggcacttttg ctggcctcct catcggcctg gcccaactca actgctccga
1561 gctgaagcta aagcggctct gttgcaggca cgggctcctg ggtgtggaca aggtgctggg
1621 ctatgccctc aacgagtggc tgcaggacat ccgcaagaac cagctgcccg gcctgctggg
1681 aggcgtgggc cccatgcact cggttgtcca gctcttccaa gggttccggg acctgctgtg
1741 gctgcccatt gagcagtaca ggaaggatgg ccgcctcatg cgggggctgc agcgaggggc
1801 tgcctccttt ggctcatcca cagcctctgc cgccctggaa ctcagcaacc ggttggtaca
1861 ggctatccag gccacagctg agaccgtgta tgacatcctg tccccggcag cccccgtctc
1921 ccgctccctg caggataagc gctctgcgcg gaggctgcgc aggggccagc agcctgccga
1981 cctgcgggag ggtgtggcca aggcctacga cacagtgcga gagggcatct tggatacagc
2041 tcagaccatc tgtgacgtgg catcgcgggg ccatgagcag aaggggctga cgggcgccgt
2101 ggggggcgtg atccgccagc tgcccccgac tgtggtgaag ccgctcatcc tggccacgga
2161 ggccacgtcc agcctgctcg ggggcatgcg caaccagatt gtccccgacg cccacaagga
2221 ccacgccctc aagtggcgct cggacagtgc ccaagactga gcctggggtg cccggcaccc
2281 agagggtgct gcccaccatg ctcctgagcc tcccaagagc tgcagcccac gggcccggcc
2341 cggcctggcc cttcagggga tggccactgt gaaggacgcc ttcccagcct gcccgttgcc
2401 aatctgctgt gagagggggg cctccctgcc ttggggcctt agccctggct ctgcactttt
2461 cctccgggga gaaaggacac tgcccctccc ccgacctggg cccacactgc tgccttctcc
2521 caggacggag gcttttggac cctcggaccc catcccactc agccaagtgt ctttctgtgt
2581 ctggggggag gaggggatga tatccgtgtg gttcgatgta ttatttttaa gctccgtgag
2641 tgcgtgggtc agtgtctgca tgaagtggaa taaactgccc accgccaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//