LOCUS BC053520 4456 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens zinc finger, FYVE domain containing 1, mRNA (cDNA clone MGC:51992 IMAGE:5493027), complete cds. ACCESSION BC053520 VERSION BC053520.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4456) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4456) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: m Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30795179. FEATURES Location/Qualifiers source 1..4456 /db_xref="H-InvDB:HIT000053897" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51992 IMAGE:5493027" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4456 /gene="ZFYVE1" /gene_synonym="DFCP1" /gene_synonym="KIAA1589" /gene_synonym="TAFF1" /db_xref="GeneID:53349" /db_xref="HGNC:HGNC:13180" /db_xref="MIM:605471" CDS 650..2983 /gene="ZFYVE1" /gene_synonym="DFCP1" /gene_synonym="KIAA1589" /gene_synonym="TAFF1" /codon_start=1 /product="zinc finger, FYVE domain containing 1" /protein_id="AAH53520.1" /db_xref="GeneID:53349" /db_xref="HGNC:HGNC:13180" /db_xref="MIM:605471" /translation="MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLR CEEELHRQERLRNHERIRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLE CQKRTHSGGNKRRHPVTVYNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEI QVTNEEDFIRKLDCKPDQHLKVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCT VGVWAAYDPVHKVAVIDTEGLLGATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDL FKFLGDASEAYLKHFTKELKATTARCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSE VPEKLIQDRFRKLGRFPEAFSSIHYKGTRTYNPPTDFSGLRRALEQLLENNTTRSPRH PGVIFKALKALSDRFSGEIPDDQMAHSSFFPDEYFTCSSLCLSCGVGCKKSMNHGKEG VPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWSGYV IECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMNF MAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACG EGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVG EAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRAC GQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL" BASE COUNT 1072 a 1174 c 1164 g 1046 t ORIGIN 1 gcgccttcct gttagtccga gctgggagaa gttcactccg atcagctgat cccaactgac 61 aacaggagag gaggaagccc gggaggcaac gaaggaggag ggtggcggag atggagatga 121 ggatggatct gccggtgtcc tgaggaatag cctctgcccc cactggcgcc ctgcggcccc 181 ccgacgccgc cttgctgcgg ccgagcttct cagtggtatc ccctgaaata ctgacttcag 241 gtcgaattat attgaaaagc tcctgaccac tttctttcat taccaaaact ttgtagctga 301 tgtccaaccg atgaacccac caccgtgaac ccatcagacc tctctcagat agccataaaa 361 gacccttcca agtcaatttt gaccacatct ttgcttgcac tttatggagg atgaaaccat 421 caaaccaaat caacgttgct gctaatacaa gagtcttaga ggcagcaaat taaaaatttg 481 aacatttgtt tgtgaagaac tataacagga catgaaaggt gttctttttt aaagtgttca 541 gaaccctgtg gaagtttcgt gcagtcttca gactcaaatc ttcgtcttca cccccggggc 601 aagctcagtg actattatat ggtgggtgtg tttccttacc agcgtgagta tgagtgccca 661 gacttcccca gcagagaagg gcctgaatcc ggggctgatg tgccaggaaa gttacgcttg 721 cagcgggact gatgaagcta tctttgagtg tgatgagtgc tgcagtctgc agtgtctccg 781 ctgcgaggag gagctccatc ggcaggagcg cctgagaaac catgagcgga taagactcaa 841 acctggccat gtcccttact gtgacctctg caagggtctc agtgggcatt taccaggtgt 901 taggcagagg gcaatagtga ggtgccagac ctgcaaaatt aacttgtgcc tggagtgcca 961 gaagaggact cattctgggg gtaacaaaag gagacaccct gttactgtgt acaatgtcag 1021 taatctccag gagtcactgg aggcagaaga gatggatgag gagaccaaga ggaagaagat 1081 gactgagaag gttgtgagtt tcctcctagt agacgaaaat gaagaaattc aggtaacaaa 1141 tgaagaagac tttattagaa aattggactg caaacctgat cagcatctga aagtggtttc 1201 catttttgga aatactggtg atggaaagtc tcatactctc aaccacactt tcttttatgg 1261 tcgtgaagtc tttaaaacct ccccgaccca ggagtcctgc actgtgggag tgtgggcagc 1321 ctatgaccca gttcacaaag tagcagtgat cgatacggaa gggctcctgg gggccaccgt 1381 gaatctaagc cagagaacac ggctgctgct taaggtcctg gccatctcag acctcgtcat 1441 ctatcgaact catgcagacc ggctgcataa cgacctcttc aaattccttg gggatgcctc 1501 agaagcttat ctgaagcact tcaccaagga gctcaaggcc accactgctc gctgtggcct 1561 ggatgtccct ttatccacac tgggccctgc agttatcatc ttccatgaga ccgtgcacac 1621 ccagctactg ggctctgatc atccctcaga ggtgccagag aagctcatcc aggaccggtt 1681 ccggaagctg ggccgtttcc ctgaagcctt tagttccatt cactacaagg gaacgaggac 1741 ttacaaccct cccacggact tttctgggct tcggcgtgct ttggagcagc tactagagaa 1801 taacaccacc cgttctcccc ggcacccggg agtcatcttc aaagccctga aggcactaag 1861 tgaccgcttc agcggtgaga tccccgatga ccagatggcg cacagctcct tttttccaga 1921 tgagtatttc acctgctcct ccttgtgcct cagctgtggg gttggatgta agaaaagcat 1981 gaatcatggg aaggaaggag tgcctcatga agccaagagc cgctgcagat actcccacca 2041 gtatgacaac cgagtgtata cctgcaaggc ctgctatgag agaggcgagg aagtcagtgt 2101 agtgcccaaa acatctgctt ccactgactc cccctggatg ggtctcgcaa aatatgcctg 2161 gtctgggtat gtgatcgaat gtcctaactg tggcgtggtc tatcgtagtc ggcagtactg 2221 gtttggaaac caagatcctg tggatacggt ggtgcggaca gagattgtgc atgtgtggcc 2281 tggaactgat gggtttctga aggacaacaa caatgctgcc cagcgcctgt tggacgggat 2341 gaacttcatg gctcagtcgg tgtccgagct tagccttgga cccaccaagg ctgtgacttc 2401 ctggctgaca gaccagatcg cccctgccta ctggaggccc aactcccaga ttctgagctg 2461 caacaagtgt gcgacgtcct ttaaagataa cgacactaag catcactgcc gagcctgtgg 2521 ggagggcttc tgtgacagct gttcatcaaa gactcggcca gtgcctgagc ggggctgggg 2581 ccctgcgcca gtgcgggtct gtgacaactg ctacgaagcc aggaacgtcc agttagctgt 2641 taccgaggca caagtggacg atgaaggtgg aacgctcatt gctcggaagg tgggcgaggc 2701 cgtgcagaac actctgggag ccgtggtgac agccattgac ataccactag gtctggtaaa 2761 ggacgcggcc aggcctgcgt actgggtgcc tgaccacgaa atcctccact gccacaactg 2821 ccggaaggag ttcagcatca agctctccaa gcaccactgc cgggcctgcg gacagggctt 2881 ctgtgatgag tgctcccatg accgccgggc tgttccttct cgtggctggg accatcccgt 2941 ccgagtctgc ttcaactgca ataaaaagcc cggtgacctt taaccccagc cccctctccg 3001 agtccttcac aattccttag gttctcaggg ttagaaacag tcttgcgagg taggccctcc 3061 tcccagtcac ctgctgtggt gtgtgtcctc tcctctccgc atccagggcc actttccctc 3121 agtgggggtg agcctggcgg caggcccgaa ggtgtggacc cctcagggca ggggaccttg 3181 caacttatcg caaaggggaa tgaacctgaa tccgttgcat ttatttcagt taaaaataat 3241 gaatatatat gtgtatatct ctctctcata tatacatatg aaaggcactc ggggcgtatc 3301 gaggctgctg ctggctgtga agacttcgca cagtctcctc cgcacagggt gaggtggcag 3361 tggcagcacg tcttcctcat gagccgagcc aggtccatgg ccaccacgtg gctggcccct 3421 tcctctgctg ctcttggagc cttggaagcc tctcctgtcc ttggctcttc cctccatgcc 3481 tgtcagctgc ctggggagtg agcctccctg gtccttcctg cctgaaacag cctgaaggga 3541 attctcccta ggtctcctgg gagtcgagtc ccaattcttg gcttaagcct gttttagtca 3601 gagaccaccc aacttagcgt gcaggtcacc ggagtgggtg gagggtcaga ggtcgggtct 3661 tcggccctga gaagtagaaa tgcaggggcc gtgctgtccc tggtccccca gggaacagca 3721 aggaaggaac tgagccttct ccagcagggc ttcctgtccc gatgcttgtg tctccactcg 3781 gctttcccaa aaggcggcac ccagctcctc aatcgaagca tctgcctccc acccctcggc 3841 cccctcaagc ccaccatctg cttctgagtg tcgcactagg attttcattg cttattttaa 3901 agtgtcttaa tcctttgttc ccagacacac aacccctcta gctctcggag gggcgatcat 3961 gagaaacctt ccagggaaac tgagcacagg atgaactgtt agttgttttt aaaagtctat 4021 ataaatattt caacagatcg taaagaaaaa atttatctct ttggtccttg caagagaagt 4081 caaaggaact tttgtttctc ctcaagagcc tggacatctc tgtctgtcat gactggaaag 4141 ggcccgttgt gctgaaatcc tatcatcatg gtggatttga tcttcagtgg ccaaacacga 4201 attaaagtat aattcttaac tgaactggtg ggtgggttga gctttaggga agtatatggc 4261 ggtcattcct ggtgcgccta tcggtgtgac atgagccctg gagtgtgtcg tccctctcag 4321 ccctgctcct cctgcctcct ggggtccagt gactgggacc ctactctaga actgtgtacc 4381 atccaattcg ccatcataaa ggaatcttcc tgcaaaaaaa aaaaaaaaaa aaaaaaaaaa 4441 aaaaaaaaaa aaaaaa //