LOCUS BC052813 1207 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence), mRNA (cDNA clone MGC:61535 IMAGE:6526165), complete cds. ACCESSION BC052813 VERSION BC052813.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1207) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1207) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: p Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42544168. FEATURES Location/Qualifiers source 1..1207 /db_xref="H-InvDB:HIT000053833" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:61535 IMAGE:6526165" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1207 /gene="ERCC1" /gene_synonym="UV20" /db_xref="GeneID:2067" /db_xref="HGNC:HGNC:3433" /db_xref="MIM:126380" CDS 132..1103 /gene="ERCC1" /gene_synonym="UV20" /codon_start=1 /product="excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)" /protein_id="AAH52813.1" /db_xref="GeneID:2067" /db_xref="HGNC:HGNC:3433" /db_xref="MIM:126380" /translation="MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQ SLPTVDTSAQAAPQTYAEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSII VSPRQRGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSL GKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQK PADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPG LGPQKVRALGKNPRSWGKERAPNKHNLRPQSFKVKKEPKTRHSGFRL" BASE COUNT 298 a 348 c 349 g 212 t ORIGIN 1 tggggacctg acgctatgga gctctcggag ttttgtgggg gacggctgtg agtggggggt 61 tcctgctgcg ggatgagaac gtagacgcca gtggctcact cgctcctggc accttccctt 121 tcaggctcca gatggaccct gggaaggaca aagagggggt gccccagccc tcagggccgc 181 cagcaaggaa gaaatttgtg atacccctcg acgaggatga ggtccctcct ggagtggcca 241 agcccttatt ccgatctaca cagagccttc ccactgtgga cacctcggcc caggcggccc 301 ctcagaccta cgccgaatat gccatctcac agcctctgga aggggctggg gccacgtgcc 361 ccacagggtc agagcccctg gcaggagaga cgcccaacca ggccctgaaa cccggggcaa 421 aatccaacag catcattgtg agccctcggc agaggggcaa tcccgtactg aagttcgtgc 481 gcaacgtgcc ctgggaattt ggcgacgtaa ttcccgacta tgtgctgggc cagagcacct 541 gtgccctgtt cctcagcctc cgctaccaca acctgcaccc agactacatc catgggcggc 601 tgcagagcct ggggaagaac ttcgccttgc gggtcctgct tgtccaggtg gatgtgaaag 661 atccccagca ggccctcaag gagctggcta agatgtgtat cctggccgac tgcacattga 721 tcctcgcctg gagccccgag gaagctgggc ggtacctgga gacctacaag gcctatgagc 781 agaaaccagc ggacctcctg atggagaagc tagagcagga cttcgtctcc cgggtgactg 841 aatgtctgac caccgtgaag tcagtcaaca aaacggacag tcagaccctc ctgaccacat 901 ttggatctct ggaacagctc atcgccgcat caagagaaga tctggcctta tgcccaggcc 961 tgggccctca gaaagtaaga gctctgggaa agaacccaag gagttggggg aaggagagag 1021 ccccaaataa acacaacctg agaccccaaa gttttaaggt gaaaaaagaa ccaaagacca 1081 gacacagtgg cttccgcctg taatcccaac attttgggag gccaaggcgg gaggactgct 1141 tgaggccaga agttggagac cagcctgggc aagtggacac ctcattttta ctaaaaaaaa 1201 aaaaaaa //