LOCUS BC052308 1900 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens ankyrin repeat and FYVE domain containing 1, mRNA (cDNA clone IMAGE:6729940), complete cds. ACCESSION BC052308 VERSION BC052308.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1900) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1900) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: p Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31317251 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1900 /db_xref="H-InvDB:HIT000099510" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6729940" /tissue_type="Breast, adenocarcinoma" /clone_lib="NIH_MGC_107" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1900 /gene="ANKFY1" /gene_synonym="ANKHZN" /gene_synonym="KIAA1255" /gene_synonym="ZFYVE14" /db_xref="GeneID:51479" /db_xref="HGNC:HGNC:20763" /db_xref="MIM:607927" CDS 12..1475 /gene="ANKFY1" /gene_synonym="ANKHZN" /gene_synonym="KIAA1255" /gene_synonym="ZFYVE14" /codon_start=1 /product="ankyrin repeat and FYVE domain containing 1" /protein_id="AAH52308.1" /db_xref="GeneID:51479" /db_xref="HGNC:HGNC:20763" /db_xref="MIM:607927" /translation="MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCALLAAQANKE SSSESFISRLLAIVADLYEQEQYSDLKIKVGDRHISAHKFVLAARSDSWSLANLSSTK ELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMS LVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKT EYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEADHNGDLALDLALSRRLESIATTLV SHKADVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGAFVNAATLGAQETPLHLVALYS SKKHSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHVSIMAGNEYVFSQLLQCKQL DLELKDHEGSTALWLAVQHITVSSDQSVNPFEDVPVVNGTSFDENSFAARLIQRGSHT DAPDTATGKARASRRGDAGVCRRQEMACKCLHPKFRN" BASE COUNT 542 a 417 c 495 g 446 t ORIGIN 1 ccgggccaga catggcggaa gaggaggtgg ccaagttgga gaagcacttg atgcttctgc 61 ggcaggagta tgtcaagctg cagaagaagc tggcggagac agagaagcgc tgcgctctct 121 tggctgcgca ggcaaacaag gagagcagca gcgagtcctt catcagccgt ctgctggcca 181 tcgtggcaga cctctacgag caggagcagt acagcgatct gaagataaag gttggggaca 241 ggcacatcag tgctcacaag tttgtcctgg cagcccgcag tgacagctgg agtctggcta 301 acttgtcttc cactaaagag ttggacctgt cagatgctaa tcctgaggtg acgatgacaa 361 tgcttcgctg gatctataca gatgagctgg agttcagaga ggatgatgtg ttcctgactg 421 aactgatgaa actagcaaat cggtttcagc tacagctcct cagggagaga tgtgagaagg 481 gtgttatgtc tctagtgaat gtcaggaact gtattcgctt ctaccagacg gcagaggagc 541 tgaatgccag cacactgatg aactactgtg cagaaattat tgcaagtcat tgggacgacc 601 tgaggaagga ggatttcagc agcatgagcg ctcagttgtt atacaaaatg atcaaatcca 661 agacagagta cccgctacat aaagccatca aagtggagag agaagacgtg gtcttcctgt 721 atctgattga aatggattcc cagctccctg ggaagctgaa tgaagcggat cataacggag 781 atctggcatt agatctagcc ctctcacgac gactggagag tattgccacc acgctggtta 841 gtcacaaagc tgatgtggac atggtggaca agagtggctg gagcttgtta cacaaaggaa 901 tccaaagagg agatctcttt gctgccactt tcctcattaa gaatggggcc tttgtcaacg 961 ctgctacact gggtgcccag gagacaccac tgcaccttgt ggccttgtac agttcaaaga 1021 aacactcagc agatgtgatg tctgagatgg cgcagattgc agaggccctt ctgcaggctg 1081 gtgccaaccc caacatgcag gacagcaagg ggaggactcc tttacatgtg tccatcatgg 1141 ccgggaatga atatgtgttc agtcagctgc tgcagtgcaa acaactagat ttagaactca 1201 aagaccacga gggcagcacg gctctgtggc tggcagtgca gcatatcaca gtgtcttctg 1261 accagtctgt gaaccccttc gaagatgtcc ccgtggtaaa tgggacttca tttgatgaga 1321 acagctttgc agccagactc atccagcgcg gcagccacac agacgcacct gacacggcga 1381 caggtaaagc acgtgcctcc cgaaggggcg acgctggggt ctgcaggcgc caggaaatgg 1441 catgtaaatg ccttcacccc aaatttagaa actgaacggc atactatgag gataattatt 1501 ttgtacttaa ttttatatac agtaaaagcc tgggttgtca tttttaaaaa tcctgtgctt 1561 caaacaattg agcagacatc aagtccctga aactgaaact tccatttatt taatgcggcg 1621 actcgcagac tctttggact caagaattcc tttgaccgtc ttaaaaattg taccccagag 1681 agcttttctt taggtgggtt ataacttcag tatttaccat attagactac actttgagaa 1741 cactgtttta atgtatttcc ttgatctgac taaataaaat aacagggata ttttaaggag 1801 agggatttgg tgtaattcag tattgagtac tggcaatgca taaaacatgg gtaggtgtca 1861 ctcacacagg aagacttgac caaaaaaaaa aaaaaaaaaa //