LOCUS BC052308 1900 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens ankyrin repeat and FYVE domain containing 1, mRNA
(cDNA clone IMAGE:6729940), complete cds.
ACCESSION BC052308
VERSION BC052308.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1900)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: p Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317251
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1900
/db_xref="H-InvDB:HIT000099510"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6729940"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1900
/gene="ANKFY1"
/gene_synonym="ANKHZN"
/gene_synonym="KIAA1255"
/gene_synonym="ZFYVE14"
/db_xref="GeneID:51479"
/db_xref="HGNC:HGNC:20763"
/db_xref="MIM:607927"
CDS 12..1475
/gene="ANKFY1"
/gene_synonym="ANKHZN"
/gene_synonym="KIAA1255"
/gene_synonym="ZFYVE14"
/codon_start=1
/product="ankyrin repeat and FYVE domain containing 1"
/protein_id="AAH52308.1"
/db_xref="GeneID:51479"
/db_xref="HGNC:HGNC:20763"
/db_xref="MIM:607927"
/translation="MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCALLAAQANKE
SSSESFISRLLAIVADLYEQEQYSDLKIKVGDRHISAHKFVLAARSDSWSLANLSSTK
ELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMS
LVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKT
EYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEADHNGDLALDLALSRRLESIATTLV
SHKADVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGAFVNAATLGAQETPLHLVALYS
SKKHSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHVSIMAGNEYVFSQLLQCKQL
DLELKDHEGSTALWLAVQHITVSSDQSVNPFEDVPVVNGTSFDENSFAARLIQRGSHT
DAPDTATGKARASRRGDAGVCRRQEMACKCLHPKFRN"
BASE COUNT 542 a 417 c 495 g 446 t
ORIGIN
1 ccgggccaga catggcggaa gaggaggtgg ccaagttgga gaagcacttg atgcttctgc
61 ggcaggagta tgtcaagctg cagaagaagc tggcggagac agagaagcgc tgcgctctct
121 tggctgcgca ggcaaacaag gagagcagca gcgagtcctt catcagccgt ctgctggcca
181 tcgtggcaga cctctacgag caggagcagt acagcgatct gaagataaag gttggggaca
241 ggcacatcag tgctcacaag tttgtcctgg cagcccgcag tgacagctgg agtctggcta
301 acttgtcttc cactaaagag ttggacctgt cagatgctaa tcctgaggtg acgatgacaa
361 tgcttcgctg gatctataca gatgagctgg agttcagaga ggatgatgtg ttcctgactg
421 aactgatgaa actagcaaat cggtttcagc tacagctcct cagggagaga tgtgagaagg
481 gtgttatgtc tctagtgaat gtcaggaact gtattcgctt ctaccagacg gcagaggagc
541 tgaatgccag cacactgatg aactactgtg cagaaattat tgcaagtcat tgggacgacc
601 tgaggaagga ggatttcagc agcatgagcg ctcagttgtt atacaaaatg atcaaatcca
661 agacagagta cccgctacat aaagccatca aagtggagag agaagacgtg gtcttcctgt
721 atctgattga aatggattcc cagctccctg ggaagctgaa tgaagcggat cataacggag
781 atctggcatt agatctagcc ctctcacgac gactggagag tattgccacc acgctggtta
841 gtcacaaagc tgatgtggac atggtggaca agagtggctg gagcttgtta cacaaaggaa
901 tccaaagagg agatctcttt gctgccactt tcctcattaa gaatggggcc tttgtcaacg
961 ctgctacact gggtgcccag gagacaccac tgcaccttgt ggccttgtac agttcaaaga
1021 aacactcagc agatgtgatg tctgagatgg cgcagattgc agaggccctt ctgcaggctg
1081 gtgccaaccc caacatgcag gacagcaagg ggaggactcc tttacatgtg tccatcatgg
1141 ccgggaatga atatgtgttc agtcagctgc tgcagtgcaa acaactagat ttagaactca
1201 aagaccacga gggcagcacg gctctgtggc tggcagtgca gcatatcaca gtgtcttctg
1261 accagtctgt gaaccccttc gaagatgtcc ccgtggtaaa tgggacttca tttgatgaga
1321 acagctttgc agccagactc atccagcgcg gcagccacac agacgcacct gacacggcga
1381 caggtaaagc acgtgcctcc cgaaggggcg acgctggggt ctgcaggcgc caggaaatgg
1441 catgtaaatg ccttcacccc aaatttagaa actgaacggc atactatgag gataattatt
1501 ttgtacttaa ttttatatac agtaaaagcc tgggttgtca tttttaaaaa tcctgtgctt
1561 caaacaattg agcagacatc aagtccctga aactgaaact tccatttatt taatgcggcg
1621 actcgcagac tctttggact caagaattcc tttgaccgtc ttaaaaattg taccccagag
1681 agcttttctt taggtgggtt ataacttcag tatttaccat attagactac actttgagaa
1741 cactgtttta atgtatttcc ttgatctgac taaataaaat aacagggata ttttaaggag
1801 agggatttgg tgtaattcag tattgagtac tggcaatgca taaaacatgg gtaggtgtca
1861 ctcacacagg aagacttgac caaaaaaaaa aaaaaaaaaa
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