LOCUS BC052303 3387 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens Rho GTPase activating protein 4, mRNA (cDNA clone MGC:59737 IMAGE:6379390), complete cds. ACCESSION BC052303 VERSION BC052303.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3387) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3387) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11386132. FEATURES Location/Qualifiers source 1..3387 /db_xref="H-InvDB:HIT000053777" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59737 IMAGE:6379390" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3387 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /db_xref="GeneID:393" /db_xref="MIM:300023" CDS 59..3019 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /codon_start=1 /product="ARHGAP4 protein" /protein_id="AAH52303.1" /db_xref="GeneID:393" /db_xref="MIM:300023" /translation="MAAHGKLRRERGLQAEYETQVKEMRWQLSEQLRCLELQGELRRE LLQELAEFMRRRAEVELEYSRGLEKLAERFSSRGGRLGSSREHQSFRKEPSLLSPLHC WAVLLQHTRQQSRESAALSEVLAGPLAQRLSHIAEDVGRLVKKSRDLEQQLQDELLEV VSELQTAKKTYQAYHMESVNAEAKLREAERQEEKRAGRSVPTTTAGATEAGPLRKSSL KKGGRLVEKLWPPQRPVAASSCAPVCWLQAGFLVHPPWWGAMCAPSTHQRQAKFMEHK LKCTKARNEYLLSLASVNAAVSNYYLHDVLDLMDCCDTGFHLALGQVLRSYTAAESRT QASQVQGLGSLEEAVEALDPPGDKAKVLEVHATVFCPPLRFDYHPHDGDEVAEICVEM ELRDEILPRAQNIQSRLDRQTIETEEVNKTLKATLQALLEVVASDDGDVLDSFQTSPS TESLKSTSSDPGSRQAGRRRGQQQETETFYLTKLQEYLSGRSILAKLQAKHEKLQEAL QRGDKEEQEVSWTQYTQRKFQKSRQPRPSSQYNQRLFGGDMEKFIQSSGQPVPLVVES CIRFINLNGLQHEGIFRVSGAQLRVSEIRDAFERGEDPLVEGCTAHDLDSVAGVLKLY FRSLEPPLFPPDLFGELLASSELEATAERVEHVSRLLWRLPAPVLVVLRYLFTFLNHL AQYSDENMMDPYNLAVCFGPTLLPVPAGQDPVALQGRVNQLVQTLIVQPDRVFPPLTS LPGPVYEKCMAPPSASCLGDAQLESLGADNEPELEAEMPAQEDDLEGVVEAVACFAYT GRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEKQVVGAGLQ TAGESGSSPEGLLASELVHRPEPCTSPEAMGPSGHRRRCLVPASPEQHVEVDKAVAQN MDSVFKELLGKTSVRQGLGPASTTSPSPGPRSPKAPPSSRLGRNKGFSRGPGAPASPS ASHPQGLDTTPKPH" misc_feature 212..430 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /note="FCH; Region: Fes/CIP4 homology domain. Alignment extended from. Highly alpha-helical" /db_xref="CDD:pfam00611" misc_feature 1730..2254 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /note="RhoGAP; Region: GTPase-activator protein for Rho-like GTPases" /db_xref="CDD:smart00324" misc_feature 2417..2584 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /note="SH3; Region: Src homology 3 domains" /db_xref="CDD:smart00326" BASE COUNT 642 a 1064 c 1143 g 538 t ORIGIN 1 ggcccgctca cggccgcgtg ggagcagtgg ggttcgacgg cgcggccgcg aggccgccat 61 ggccgctcac gggaagctgc ggcgggagcg ggggctgcag gctgagtatg agacgcaagt 121 caaagagatg cgctggcagc tgagcgagca gctgcgctgc ctggagctgc agggcgagct 181 gcggcgggag ttgctgcagg agctggcaga gttcatgcgg cgccgcgctg aggtggagct 241 ggaatactcc cggggcctgg aaaagctggc cgagcgcttc tccagccgtg gaggccgcct 301 ggggagcagc cgggagcacc aaagcttccg gaaggagccg tccctcctgt cgcccttgca 361 ctgctgggcg gtgctgctgc agcacacgcg gcagcagagc cgggagagcg cggccctgag 421 tgaggtgctg gccgggcccc tggcccagcg cctgagtcac attgcagagg acgtggggcg 481 cctggtcaag aagagcaggg atctggagca gcagctgcag gatgagctcc tggaggtggt 541 ctcagagctc cagacggcca agaagacgta ccaggcatat cacatggaga gcgtgaatgc 601 cgaggccaag ctccgggagg ccgagcggca ggaggagaag cgggcaggcc ggagtgtccc 661 caccaccacc gctggtgcca ctgaggcagg gcccctccgc aagagctccc tcaagaaggg 721 agggaggctg gtggagaagc tctggccccc gcagaggcct gtggccgctt ccagctgtgc 781 acctgtgtgc tggctccaag ctgggtttct cgtgcaccct ccatggtggg gtgccatgtg 841 cgcaccttcc actcatcagc ggcaggccaa gttcatggag cacaaactca agtgcacaaa 901 ggcgcgcaac gagtacctgc ttagcctggc tagtgtcaac gctgctgtca gtaactacta 961 cctgcatgac gtcttggacc tcatggactg ctgtgacaca gggttccacc tggccctggg 1021 gcaggtgctc cggagctaca cggccgctga gagccgcacc caagcctccc aagtgcaggg 1081 cctgggcagc ctggaagaag ctgtggaggc cctggatcct ccaggggaca aagccaaggt 1141 tctcgaggtg catgctaccg tcttctgtcc cccgctgcgc tttgactacc acccccatga 1201 tggggatgag gtggctgaga tctgcgttga aatggagctg cgggacgaga ttctgcccag 1261 agcccagaac atccagagcc gcctggaccg acagaccatt gagacagagg aggtgaacaa 1321 gactctgaag gcgacactgc aggccctgct ggaggtggtg gcctcggatg acggggatgt 1381 gcttgattcc ttccagacca gcccctccac cgagtccctc aagtccacca gctcagaccc 1441 aggcagccgg caggcgggcc ggaggcgcgg ccagcagcag gagaccgaaa ccttctacct 1501 cacgaagctc caggagtatc tgagtggacg gagcatcctc gccaagctgc aggccaagca 1561 cgagaagctg caggaggccc ttcagcgagg tgacaaggag gagcaggagg tgtcttggac 1621 ccagtacaca cagagaaaat tccagaagag ccgccagccc cgccccagct cccagtataa 1681 ccagagactc tttgggggag acatggagaa gtttatccag agctcaggcc agcctgtgcc 1741 cctggtggtg gagagctgca ttcgcttcat caacctcaat ggcctgcagc atgaaggcat 1801 cttccgggta tcgggtgccc agctccgggt ctcagagatc cgtgatgcct tcgagagagg 1861 ggaggaccca ctggtggagg gctgcactgc ccacgacctg gactcggtgg ccggggtgct 1921 gaagctctac ttccggagcc tggagccccc actcttcccc ccagacctgt tcggcgagct 1981 gctggcttct tcggagctgg aggccacagc ggagagggtg gagcacgtga gccgcctgct 2041 gtggcggctg cccgcgccgg tgctggtggt tctgcgctac ctcttcacct tcctcaacca 2101 cctggcccag tacagcgatg agaacatgat ggacccctac aacctggccg tgtgcttcgg 2161 gcccacgctg ctaccggtgc ccgctgggca ggacccggtg gcgctgcagg gccgggtgaa 2221 ccagctggtg cagacgctca tagtgcagcc cgatcgggtc ttcccgcccc tgacctcgct 2281 gcctggcccc gtctacgaga agtgcatggc accgccttcc gccagctgcc tgggggacgc 2341 ccagctggag agcctggggg cggacaatga gccggagctg gaagccgaga tgcccgcaca 2401 ggaggatgac ctggaggggg tcgtggaggc tgtggcctgc tttgcctaca cgggccgcac 2461 agcccaggag ctgagcttcc ggcgggggga cgtactgcgg ctgcacgaga gggcctcgag 2521 cgactggtgg cggggggagc acaacggcat gcggggcctc atcccccaca agtatatcac 2581 gctgcccgcc gggacggaga agcaggtggt gggcgcaggg ctgcagactg caggggagtc 2641 tgggagcagt cccgagggcc tcctggcatc ggagctggtc caccggccag agccatgcac 2701 ctcacctgag gccatgggac cctctggaca cagacgacgc tgcttggtcc cagcctcccc 2761 agagcaacac gtggaggtgg ataaggctgt ggcacagaac atggactctg tgtttaagga 2821 gctcttggga aagacctctg tccgccaggg ccttgggcca gcatctacca cctctcccag 2881 tcctgggccc cgaagcccaa aggccccgcc cagcagccgc ctgggcagga acaaaggctt 2941 ctcccggggc cctggggccc cagcctcacc ctcagcttcc cacccccagg gcctagacac 3001 gacccccaag ccacactgag gtgccgctgc tggagatgcg tgcccccggc ggctacccgc 3061 tggaccggcc actctcccca gcccccttgc ttctctccag ccctgtccag caagtgcagg 3121 gtgcctgcac ttcaccctgt gcagagaggt gggatggggc cgtgcacaca gggatgcccg 3181 ctccacatcc tgcctgcccc tcagccctgg cccaggcccc ttttggaggc agctgaggaa 3241 ggatgctggg gaaagccctc ttctgcagct ttgtggaagg ctgatcagtg gctgctgggt 3301 ggcgggtacc cttgctcaga tgcctggcag ggctgggtgg cgattcataa agacctcgtg 3361 ttgattccca aaaaaaaaaa aaaaaaa //