LOCUS BC051786 4867 bp mRNA linear HUM 04-OCT-2017 DEFINITION Homo sapiens replication factor C (activator 1) 1, 145kDa, mRNA (cDNA clone MGC:57542 IMAGE:5521245), complete cds. ACCESSION BC051786 VERSION BC051786.3 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4867) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4867) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov REFERENCE 3 (bases 1 to 4867) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (04-OCT-2017) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK Sequence update by database staff to remove vector contamination COMMENT On Oct 4, 2017 this sequence version replaced BC051786.2. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: f Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15011930. FEATURES Location/Qualifiers source 1..4867 /db_xref="H-InvDB:HIT000053679" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57542 IMAGE:5521245" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4867 /gene="RFC1" /gene_synonym="A1" /gene_synonym="MGC51786" /gene_synonym="MHCBFB" /gene_synonym="PO-GA" /gene_synonym="RECC1" /gene_synonym="RFC" /gene_synonym="RFC140" /db_xref="GeneID:5981" /db_xref="MIM:102579" CDS 75..3521 /gene="RFC1" /gene_synonym="A1" /gene_synonym="MGC51786" /gene_synonym="MHCBFB" /gene_synonym="PO-GA" /gene_synonym="RECC1" /gene_synonym="RFC" /gene_synonym="RFC140" /codon_start=1 /product="RFC1 protein" /protein_id="AAH51786.1" /db_xref="GeneID:5981" /db_xref="MIM:102579" /translation="MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIK VNSSRKEDDFKQKQPSKKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQD PVTYISETDEEDDFMCKKAASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKL TPTSVLDYFGTGSVQRSNKKMVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQ LHEDEEFARTLAMLDEEPKTKKARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVS DERKSYSPRKQSKYESSKESQQHSKSSADKIGEVSSPKASSKLAIMKRKEESSYKEIE PVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPEDSEKKRTNYQAYRSYLNREGPK ALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVM GRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIAVETEMKKESKLERTPQ KNVQGKRKISPSKKESESKKSRPTSKRDSLAKTIKKETDVFWKSLDFKEQVAEETSGD NKARNLADDSSENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSSE DKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRS KSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGL IKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPP AMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVARKVF AAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKHLMLLSRAADS ICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPSWLGKHSSTGKH DRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDVVALMDTYYL MKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIKASRHSTS PSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKGKGKSS KK" misc_feature 1260..1514 /gene="RFC1" /gene_synonym="A1" /gene_synonym="MGC51786" /gene_synonym="MHCBFB" /gene_synonym="PO-GA" /gene_synonym="RECC1" /gene_synonym="RFC" /gene_synonym="RFC140" /note="Lig; Region: NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]" /db_xref="CDD:COG0272" misc_feature 2016..2456 /gene="RFC1" /gene_synonym="A1" /gene_synonym="MGC51786" /gene_synonym="MHCBFB" /gene_synonym="PO-GA" /gene_synonym="RECC1" /gene_synonym="RFC" /gene_synonym="RFC140" /note="AAA; Region: ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes" /db_xref="CDD:pfam00004" BASE COUNT 1666 a 909 c 1092 g 1200 t ORIGIN 1 atcctgagcc tcgataacag attcctcaac cggcccaccc gccagccagc cagcgccttc 61 atcctggggc tgcgatggac attcggaaat tctttggagt aataccaagt ggaaagaaac 121 ttgtaagtga aacagtaaag aagaatgaga aaacaaagtc tgatgaagaa actttaaaag 181 caaagaaagg aataaaggaa atcaaggtaa atagctcccg taaagaggat gacttcaaac 241 aaaagcaacc aagcaagaaa aagaggatca tctatgattc agattcagag tcagaggaga 301 cgttgcaggt aaaaaatgcc aaaaagccac cagaaaaact gccagtatct tctaaacctg 361 gtaaaatttc acggcaggat cctgttacat acatttcaga aacagatgaa gaagatgact 421 ttatgtgtaa gaaggcggcc tctaaatcaa aagagaatgg aagatctaca aatagtcatc 481 ttggaacatc aaacatgaaa aagaatgaag aaaacactaa gaccaagaat aagcctttat 541 caccaataaa acttacaccc acatcagtac ttgattattt tggaactgga agtgtccaaa 601 gatctaataa gaagatggtg gcaagcaaaa gaaaagagct ttcacaaaat acagatgagt 661 ctggattaaa tgatgaagcc atcgccaagc aattacagct tgatgaagat gcggagctgg 721 agaggcagtt gcatgaagat gaagagtttg ccagaacatt agccatgttg gatgaagaac 781 ccaagaccaa aaaggctcga aaggacacag aagcgggaga aacgttttca tctgtccaag 841 ccaatttaag taaagcagaa aaacataaat atcctcataa agtaaaaaca gcacaagttt 901 cagatgaaag aaagagctac agtcctagga agcaaagtaa atatgaaagt tcaaaagaat 961 ctcagcaaca ttccaagtca tcagctgaca aaataggaga agtctcttct cccaaggcca 1021 gttctaagct ggcaattatg aaaagaaaag aagagagctc ttataaagaa atagagcctg 1081 tggcctcaaa aagaaaagaa aatgccatta aattgaaagg agagacaaaa actcctaaga 1141 aaaccaaaag ttctccagct aaaaaagagt ctgtaagtcc tgaagattct gaaaagaaac 1201 gcactaatta tcaagcttat cgaagctact taaatcgaga aggtcccaag gctctgggct 1261 ccaaagaaat accaaaggga gctgaaaatt gcttggaagg ccttatattt gtaatcacag 1321 gcgtgctgga gtctattgaa cgagatgagg ccaagtctct aattgaacgt tatgggggaa 1381 aagtaacagg aaatgtcagc aagaaaacaa attatcttgt catgggtcgt gatagtggac 1441 agtccaagag tgataaggcc gcagccttgg ggacaaaaat tattgatgaa gatggcctgt 1501 tgaatctgat tcggactatg ccaggcaaga aatccaagta tgaaatagca gttgaaactg 1561 agatgaagaa agagtccaaa ctggagagaa caccccaaaa aaatgtccaa ggaaaaagaa 1621 aaattagtcc atctaaaaag gaatcagaat ctaaaaagag caggccgact tccaaaaggg 1681 acagtttggc aaagacaata aaaaaggaaa cagatgtgtt ttggaaaagc ctggatttca 1741 aggagcaggt ggctgaggag acaagtggtg acaacaaggc taggaatttg gctgatgaca 1801 gcagtgaaaa caaagtggaa aatttgctct gggtggataa atataagcca acctcgctca 1861 agaccataat tggacagcaa ggtgaccaga gctgtgccaa caaactccta cgctggctcc 1921 gaaactggca aaagagttct tccgaagata aaaaacacgc agcaaagttt ggtaaatttt 1981 ccggcaaaga tgatggctct agttttaaag cagcgttgct gtcaggccct cctggtgttg 2041 gcaaaaccac cacagcttcc ctggtgtgtc aggagttggg atacagctac gtggaactga 2101 atgcaagtga cacccggagt aagagcagtt tgaaggcgat tgttgctgag tcactgaaca 2161 ataccagcat caaaggcttt tattcaaatg gagcagcctc ttcagtaagc acgaaacatg 2221 ctctcatcat ggatgaagta gatggcatgg caggcaatga ggatagggga ggaattcagg 2281 aattaattgg cctgataaaa catactaaaa ttcccattat ttgtatgtgc aatgatagaa 2341 atcatcccaa gattcgctct ctggttcatt attgttttga tcttcgtttt caaagacctc 2401 gggttgaaca gattaagggt gctatgatgt ctattgcatt taaagaaggt ttaaagattc 2461 cccctccagc tatgaatgaa ataattttgg gagccaatca agatatcaga caggttttac 2521 ataatctgag tatgtggtgt gcacgaagta aagcattaac ctatgaccag gccaaagctg 2581 attctcacag agccaaaaag gatatcaaaa tgggcccgtt tgatgttgcc cggaaagtgt 2641 ttgcagctgg agaggagact gctcacatgt cacttgtgga caagtcagat ctcttttttc 2701 atgattattc aatagcaccc ctcttcgtcc aggaaaatta catacacgtg aagcctgtag 2761 cagcaggggg tgacatgaaa aagcacctga tgcttttaag cagagcagca gacagcatat 2821 gcgatggtga cctagtggac agccagatcc ggagtaagca aaactggagt cttctgcctg 2881 cgcaggccat ttatgccagt gttcttcctg gagagttgat gagggggtac atgacccagt 2941 ttcccacctt cccaagctgg ctggggaagc actcgtctac aggcaaacat gatcgtattg 3001 ttcaggacct ggccttgcat atgagtctca gaacttactc cagcaaaagg actgtaaaca 3061 tggattatct gtcgcttcta agggatgcac ttgtacagcc cttgacctca caaggagtag 3121 acggagtaca ggatgttgtt gcacttatgg acacatatta tttgatgaaa gaagactttg 3181 agaatatcat ggaaatcagc agctggggtg gcaaacctag tcccttttca aagctggatc 3241 ccaaggtgaa agcagccttc acaagagctt acaataagga agcccacctt actccatact 3301 cacttcaagc tataaaggca tctagacaca gcacaagccc atccctggat tcggaataca 3361 atgaagaatt aaatgaagat gactctcaat ctgatgagaa agaccaagat gctatagaaa 3421 ctgatgccat gatcaagaaa aagacaaaat cttcaaagcc ttcaaaacca gaaaaagata 3481 aggagcccag aaaaggaaaa ggaaaaagtt cgaagaaatg aaaccatttt tcactagcga 3541 cagccacttt ttactctccc tcctgaccag tccagctggt ctagagaaag ccttgttttt 3601 tcccagagca accatgtttt agcataatgg gatgacctgg tgtcccatta taaataaagg 3661 gtggtatggc tagaagggta tgagcagtag gcttatgtac acctcttata gaggttgata 3721 ggactgcttg ggtcctccac tgtcctctgt caatctagtt agacgtgctt ctgaatgact 3781 gtagaattgg aactagaaac tacacctggg ctttggagtc agattttagt taacaataat 3841 gagcctggga gcagtagtac taaggcgtct tttgtaggct taagaattta tcctaatggc 3901 ctttatagga ccaatgctga ttttttttaa aggcagttcc tattatgtgg tgaaattttg 3961 taaataaatg attatacaaa acagtcacca cctagaactg ggtattcttt gtacattgtc 4021 agatatcttt caaagtataa attaggaata aaaatgttcc acatgatatg tgtacaaatt 4081 ctttttaaga ttgtcatctt gtacagcaaa atattatgtt ggtatattac ttccttatta 4141 atttgcaaat gattggatta aaaaagctca ctgtattcct tactaacctg ttgtgtgaaa 4201 cataacattg gcagtcgagg agtcagaact cggattccca gcctcactcc ctctgtgtgt 4261 gttgaccacg tctctgctgt gaataggatt tcatgcagtg gtctgttatg gggctttgca 4321 gcgtgggggg ctgcagaaga ttctcagaca ttcttatcct tctggagtct caacccatca 4381 ggttcagacc agtaggaacc aggctgggtc aggctcttaa tttcactatg gtgggggaca 4441 aaatgaacac tggcttttgt tcactttgcc cctgagagat ctagtcctgt cctgtgatgg 4501 cttccacaaa ccctgttgga agtttgggtt attcctataa ctgtatgtgt tgagtggccg 4561 tgaggctatg gacctagcct ggaatttaga tgtgtagcta ttttttaatc ttgttggtaa 4621 atgctcagag gtctgtgcta cctctgtgag gtatatacta aaatgaatgt aaaataagga 4681 tcgtattccc tgctttaagg aactggtagt cttgtttggg tgatgagaca aagttcttga 4741 gacatttaaa ctgtatttac cagtgtgaaa aatgtcattt atggagatta attcattatg 4801 gaaataaaac attgcctaag cccttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 4861 aaaaaaa //