LOCUS BC051337 2050 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens interleukin 9 receptor, mRNA (cDNA clone MGC:59852 IMAGE:6304829), complete cds. ACCESSION BC051337 VERSION BC051337.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2050) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2050) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: k Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29171683 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..2050 /db_xref="H-InvDB:HIT000053631_04" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59852 IMAGE:6304829" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_99" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2050 /gene="IL9R" /gene_synonym="CD129" /db_xref="GeneID:3581" /db_xref="HGNC:HGNC:6030" /db_xref="MIM:300007" CDS 69..1067 /gene="IL9R" /gene_synonym="CD129" /codon_start=1 /product="IL9R protein" /protein_id="AAH51337.1" /db_xref="GeneID:3581" /db_xref="HGNC:HGNC:6030" /db_xref="MIM:300007" /translation="MHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQS LAGWTLESEALRRDMGTWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRID CHWSAPELGQGSSPWLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTA CLGGSRSAWWTRSTCPGDTSNISSGHCILTWSISPALEPMTTLLSYELAFKKQEEAWE QAQHRDHIVGVTWLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQWSEWSQP VCFQAPQRQGPLIPPWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC" BASE COUNT 408 a 606 c 610 g 426 t ORIGIN 1 cagagatagt tgggtgacaa atcacctcca ggttggggat gcctcagact tgtgatggga 61 ctgggcagat gcatctggga agtaactgct gcaagaacgg acagacactg ctgcagagaa 121 cttgccacgg tgtttcatgc tgtggctggt ggttccaggc tgcacgctcc attctaggaa 181 aggggccctc agcccagtcc cttgcaggct ggaccttgga gagtgaggcc ctgaggcgag 241 acatgggcac ctggctcctg gcctgcatct gcatctgcac ctgtgtctgc ttgggagtct 301 ctgtcacagg ggaaggacaa gggccaaggt ctagaacctt cacctgcctc accaacaaca 361 ttctcaggat cgattgccac tggtctgccc cagagctggg acagggctcc agcccctggc 421 tcctcttcac caggctcctg gcggcacaca taagtgcatc ttgcggggca gtgagtgcac 481 cgtcgtgctg ccacctgagg cagtgctcgt gccatctgac aatttcacca tcactttcca 541 ccactgcatg tctgggaggg agcaggtcag cctggtggac ccggagtacc tgccccggag 601 acacgagcaa catcagttct ggccactgca tcctgacctg gagcatcagt cctgccttgg 661 agccaatgac cacacttctc agctatgagc tggccttcaa gaagcaggaa gaggcctggg 721 agcaggccca gcacagggat cacattgtcg gggtgacctg gcttatactt gaagcctttg 781 agctggaccc tggctttatc catgaggcca ggctgcgtgt ccagatggcc acactggagg 841 atgatgtggt agaggaggag cgttatacag gccagtggag tgagtggagc cagcctgtgt 901 gcttccaggc tccccagaga caaggccctc tgatcccacc ctgggggtgg ccaggcaaca 961 cccttgttgc tgtgtccatc tttctcctgc tgactggccc gacctacctc ctgttcaagc 1021 tgtcgcccag acttggatgg gggcccacgg ggccggtgtg ctgttgagcc aggactgtgc 1081 tggcacccca cagggagcct tggagccctg cgtccaggag gccactgcac tgctcacttg 1141 tggcccagcg cgtccttgga aatctgtggc cctggaggag gaacaggagg gccctgggac 1201 caggctcccg gggaacctga gctcagagga tgtgctgcca gcagggtgta cggagtggag 1261 ggtacagacg cttgcctatc tgccacagga ggactgggcc cccacgtccc tgactaggcc 1321 ggctccccca gactcagagg gcagcaggag cagcagcagc agcagcagca gcaacaacaa 1381 caactactgt gccttgggct gctatggggg atggcacctc tcagccctcc caggaaacac 1441 acagagctct gggcccatcc cagccctggc ctgtggcctt tcttgtgacc atcagggcct 1501 ggagacccag caaggagttg cctgggtgct ggctggtcac tgccagaggc ctgggctgca 1561 tgaggacctc cagggcatgt tgctcccttc tgtcctcagc aaggctcggt cctggacatt 1621 ctaggtccct gactcgccag atgcatcatg tccattttgg gaaaatggac tgaagtttct 1681 ggagcccttg tctgagactg aacctcctga gaaggggccc ctagcagcgg tcagaggtcc 1741 tgtctggatg gaggctggag gctcccccct caacccctct gctcagtgcc tgtggggagc 1801 agcctctacc ctcagcatcc tggccacaag ttcttccttc cattgtccct tttctttatc 1861 cctgacctct ctgagaagtg gggtgtggtc tctcagctgt tctgccctca tacccttaaa 1921 gggccagcct gggcccagtg gacacaggta aggcaccatg accacctggt gtgacctctc 1981 tgtgccttac tgaggcacct ttctagagat taaaaggggc ttgatggctg ttaaaaaaaa 2041 aaaaaaaaaa //