LOCUS BC051337 2050 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens interleukin 9 receptor, mRNA (cDNA clone MGC:59852
IMAGE:6304829), complete cds.
ACCESSION BC051337
VERSION BC051337.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2050)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2050)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29171683
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2050
/db_xref="H-InvDB:HIT000053631_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59852 IMAGE:6304829"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2050
/gene="IL9R"
/gene_synonym="CD129"
/db_xref="GeneID:3581"
/db_xref="HGNC:HGNC:6030"
/db_xref="MIM:300007"
CDS 69..1067
/gene="IL9R"
/gene_synonym="CD129"
/codon_start=1
/product="IL9R protein"
/protein_id="AAH51337.1"
/db_xref="GeneID:3581"
/db_xref="HGNC:HGNC:6030"
/db_xref="MIM:300007"
/translation="MHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQS
LAGWTLESEALRRDMGTWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRID
CHWSAPELGQGSSPWLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTA
CLGGSRSAWWTRSTCPGDTSNISSGHCILTWSISPALEPMTTLLSYELAFKKQEEAWE
QAQHRDHIVGVTWLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQWSEWSQP
VCFQAPQRQGPLIPPWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC"
BASE COUNT 408 a 606 c 610 g 426 t
ORIGIN
1 cagagatagt tgggtgacaa atcacctcca ggttggggat gcctcagact tgtgatggga
61 ctgggcagat gcatctggga agtaactgct gcaagaacgg acagacactg ctgcagagaa
121 cttgccacgg tgtttcatgc tgtggctggt ggttccaggc tgcacgctcc attctaggaa
181 aggggccctc agcccagtcc cttgcaggct ggaccttgga gagtgaggcc ctgaggcgag
241 acatgggcac ctggctcctg gcctgcatct gcatctgcac ctgtgtctgc ttgggagtct
301 ctgtcacagg ggaaggacaa gggccaaggt ctagaacctt cacctgcctc accaacaaca
361 ttctcaggat cgattgccac tggtctgccc cagagctggg acagggctcc agcccctggc
421 tcctcttcac caggctcctg gcggcacaca taagtgcatc ttgcggggca gtgagtgcac
481 cgtcgtgctg ccacctgagg cagtgctcgt gccatctgac aatttcacca tcactttcca
541 ccactgcatg tctgggaggg agcaggtcag cctggtggac ccggagtacc tgccccggag
601 acacgagcaa catcagttct ggccactgca tcctgacctg gagcatcagt cctgccttgg
661 agccaatgac cacacttctc agctatgagc tggccttcaa gaagcaggaa gaggcctggg
721 agcaggccca gcacagggat cacattgtcg gggtgacctg gcttatactt gaagcctttg
781 agctggaccc tggctttatc catgaggcca ggctgcgtgt ccagatggcc acactggagg
841 atgatgtggt agaggaggag cgttatacag gccagtggag tgagtggagc cagcctgtgt
901 gcttccaggc tccccagaga caaggccctc tgatcccacc ctgggggtgg ccaggcaaca
961 cccttgttgc tgtgtccatc tttctcctgc tgactggccc gacctacctc ctgttcaagc
1021 tgtcgcccag acttggatgg gggcccacgg ggccggtgtg ctgttgagcc aggactgtgc
1081 tggcacccca cagggagcct tggagccctg cgtccaggag gccactgcac tgctcacttg
1141 tggcccagcg cgtccttgga aatctgtggc cctggaggag gaacaggagg gccctgggac
1201 caggctcccg gggaacctga gctcagagga tgtgctgcca gcagggtgta cggagtggag
1261 ggtacagacg cttgcctatc tgccacagga ggactgggcc cccacgtccc tgactaggcc
1321 ggctccccca gactcagagg gcagcaggag cagcagcagc agcagcagca gcaacaacaa
1381 caactactgt gccttgggct gctatggggg atggcacctc tcagccctcc caggaaacac
1441 acagagctct gggcccatcc cagccctggc ctgtggcctt tcttgtgacc atcagggcct
1501 ggagacccag caaggagttg cctgggtgct ggctggtcac tgccagaggc ctgggctgca
1561 tgaggacctc cagggcatgt tgctcccttc tgtcctcagc aaggctcggt cctggacatt
1621 ctaggtccct gactcgccag atgcatcatg tccattttgg gaaaatggac tgaagtttct
1681 ggagcccttg tctgagactg aacctcctga gaaggggccc ctagcagcgg tcagaggtcc
1741 tgtctggatg gaggctggag gctcccccct caacccctct gctcagtgcc tgtggggagc
1801 agcctctacc ctcagcatcc tggccacaag ttcttccttc cattgtccct tttctttatc
1861 cctgacctct ctgagaagtg gggtgtggtc tctcagctgt tctgccctca tacccttaaa
1921 gggccagcct gggcccagtg gacacaggta aggcaccatg accacctggt gtgacctctc
1981 tgtgccttac tgaggcacct ttctagagat taaaaggggc ttgatggctg ttaaaaaaaa
2041 aaaaaaaaaa
//