LOCUS BC050428 1533 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens katanin p60 (ATPase-containing) subunit A 1, mRNA (cDNA clone MGC:54153 IMAGE:5764501), complete cds. ACCESSION BC050428 VERSION BC050428.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1533) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1533) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: g Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9951918. FEATURES Location/Qualifiers source 1..1533 /db_xref="H-InvDB:HIT000053450" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:54153 IMAGE:5764501" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1533 /gene="KATNA1" /db_xref="GeneID:11104" /db_xref="MIM:606696" CDS 187..1122 /gene="KATNA1" /codon_start=1 /product="KATNA1 protein" /protein_id="AAH50428.1" /db_xref="GeneID:11104" /db_xref="MIM:606696" /translation="MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVK DTYLQQKWQQVWQEINVEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPV PVERRPSPGPRKRQSSQYSDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQ NKGREEKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLF EMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKM VMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP" misc_feature 688..1107 /gene="KATNA1" /note="AAA; Region: ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes" /db_xref="CDD:pfam00004" BASE COUNT 495 a 292 c 360 g 386 t ORIGIN 1 gccgcgccgg caggtggtgt tgacgattga actgggcagt actggggccg tgagcggaga 61 gcaaagtggg ctggactggg tcaggccctc cttcctcgct gccgggatct ccactccgcc 121 aatcccctgt gcctggcgtt gggcggtttc ccgaggagct tgggccgccg cagcttacag 181 ttgaacatga gtcttcttat gattagtgag aatgtaaaat tggctcgtga atatgcattg 241 ctgggaaact atgactctgc gatggtctat tatcagggag ttcttgacca aatgaacaag 301 tatctgtact cagtcaaaga tacatacctc cagcagaaat ggcaacaggt ttggcaggaa 361 ataaatgtgg aagctaaaca tgttaaagat atcatgaaaa cactagagag ctttaaactg 421 gacagcactc ccttgaaagc ggcacagcat gaccttccag cttctgaggg agaagtctgg 481 tccatgcctg tacctgttga acgaagaccc tcaccaggac ctagaaaacg ccaatcttct 541 cagtacagtg accctaaatc acatggtaat cgtccaagta caactgtcag agttcaccgt 601 tcatctgcac agaatgttca caatgacaga gggaaagctg ttcgttgtcg tgaaaagaaa 661 gaacagaata aaggaagaga ggaaaaggga gtactgatgg tcggcccacc tggcacgggg 721 aagacgctcc ttgctaaagc agtagctaca gaatgcaaga caacattctt caatgtctct 781 tcatcaactt tgacttccaa atacagagga gaatctgaga agcttgttcg tcttctgttt 841 gaaatggctc gattttattc tccagccacc atatttattg atgagataga ctccatctgt 901 agtcgccgag ggacttctga agaacatgaa gcaagcagaa gggtgaaagc ggagctgctg 961 gttcagatgg atggtgttgg aggtacttct gaaaatgatg acccttccaa aatggttatg 1021 gttctggcag ctactaattt tccctgggat atagatgagg ctttaagacg acgccttgag 1081 aaacgaatct atattccttt gccgtcaggg atgcgtcctt gatggcaatg agaaggcgca 1141 ttgaaggttt gactccagag gaaatccgaa atctttccaa agaagaaatg cacatgccta 1201 caactatgga ggatttcgag atggctttaa aaaaggtttc taagtcagtg tctgctgcag 1261 acattgaaag atacgagaaa tggatatttg agtttggatc atgctaaatt ctcacatgta 1321 aactgtgaga aatgtgcctt aagtgtttga atattaaatg cagtaattca ttgtactgag 1381 tgctatattt tttttaactt tcataatggt aagatttttt taaaaaaacc cttatgattc 1441 tgaataaagg caatattttt aagctgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //