LOCUS BC050428 1533 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens katanin p60 (ATPase-containing) subunit A 1, mRNA
(cDNA clone MGC:54153 IMAGE:5764501), complete cds.
ACCESSION BC050428
VERSION BC050428.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1533)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: g Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9951918.
FEATURES Location/Qualifiers
source 1..1533
/db_xref="H-InvDB:HIT000053450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54153 IMAGE:5764501"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1533
/gene="KATNA1"
/db_xref="GeneID:11104"
/db_xref="MIM:606696"
CDS 187..1122
/gene="KATNA1"
/codon_start=1
/product="KATNA1 protein"
/protein_id="AAH50428.1"
/db_xref="GeneID:11104"
/db_xref="MIM:606696"
/translation="MSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVK
DTYLQQKWQQVWQEINVEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPV
PVERRPSPGPRKRQSSQYSDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQ
NKGREEKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLF
EMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKM
VMVLAATNFPWDIDEALRRRLEKRIYIPLPSGMRP"
misc_feature 688..1107
/gene="KATNA1"
/note="AAA; Region: ATPase family associated with various
cellular activities (AAA). AAA family proteins often
perform chaperone-like functions that assist in the
assembly, operation, or disassembly of protein complexes"
/db_xref="CDD:pfam00004"
BASE COUNT 495 a 292 c 360 g 386 t
ORIGIN
1 gccgcgccgg caggtggtgt tgacgattga actgggcagt actggggccg tgagcggaga
61 gcaaagtggg ctggactggg tcaggccctc cttcctcgct gccgggatct ccactccgcc
121 aatcccctgt gcctggcgtt gggcggtttc ccgaggagct tgggccgccg cagcttacag
181 ttgaacatga gtcttcttat gattagtgag aatgtaaaat tggctcgtga atatgcattg
241 ctgggaaact atgactctgc gatggtctat tatcagggag ttcttgacca aatgaacaag
301 tatctgtact cagtcaaaga tacatacctc cagcagaaat ggcaacaggt ttggcaggaa
361 ataaatgtgg aagctaaaca tgttaaagat atcatgaaaa cactagagag ctttaaactg
421 gacagcactc ccttgaaagc ggcacagcat gaccttccag cttctgaggg agaagtctgg
481 tccatgcctg tacctgttga acgaagaccc tcaccaggac ctagaaaacg ccaatcttct
541 cagtacagtg accctaaatc acatggtaat cgtccaagta caactgtcag agttcaccgt
601 tcatctgcac agaatgttca caatgacaga gggaaagctg ttcgttgtcg tgaaaagaaa
661 gaacagaata aaggaagaga ggaaaaggga gtactgatgg tcggcccacc tggcacgggg
721 aagacgctcc ttgctaaagc agtagctaca gaatgcaaga caacattctt caatgtctct
781 tcatcaactt tgacttccaa atacagagga gaatctgaga agcttgttcg tcttctgttt
841 gaaatggctc gattttattc tccagccacc atatttattg atgagataga ctccatctgt
901 agtcgccgag ggacttctga agaacatgaa gcaagcagaa gggtgaaagc ggagctgctg
961 gttcagatgg atggtgttgg aggtacttct gaaaatgatg acccttccaa aatggttatg
1021 gttctggcag ctactaattt tccctgggat atagatgagg ctttaagacg acgccttgag
1081 aaacgaatct atattccttt gccgtcaggg atgcgtcctt gatggcaatg agaaggcgca
1141 ttgaaggttt gactccagag gaaatccgaa atctttccaa agaagaaatg cacatgccta
1201 caactatgga ggatttcgag atggctttaa aaaaggtttc taagtcagtg tctgctgcag
1261 acattgaaag atacgagaaa tggatatttg agtttggatc atgctaaatt ctcacatgta
1321 aactgtgaga aatgtgcctt aagtgtttga atattaaatg cagtaattca ttgtactgag
1381 tgctatattt tttttaactt tcataatggt aagatttttt taaaaaaacc cttatgattc
1441 tgaataaagg caatattttt aagctgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//