LOCUS BC050341 4182 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens cullin-associated and neddylation-dissociated 1, mRNA (cDNA clone MGC:51033 IMAGE:5265409), complete cds. ACCESSION BC050341 VERSION BC050341.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4182) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4182) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 90 Row: p Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361793. FEATURES Location/Qualifiers source 1..4182 /db_xref="H-InvDB:HIT000053417" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51033 IMAGE:5265409" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4182 /gene="CAND1" /gene_synonym="KIAA0829" /gene_synonym="TIP120" /gene_synonym="TIP120A" /db_xref="GeneID:55832" /db_xref="HGNC:HGNC:30688" /db_xref="MIM:607727" CDS 134..3826 /gene="CAND1" /gene_synonym="KIAA0829" /gene_synonym="TIP120" /gene_synonym="TIP120A" /codon_start=1 /product="cullin-associated and neddylation-dissociated 1" /protein_id="AAH50341.1" /db_xref="GeneID:55832" /db_xref="HGNC:HGNC:30688" /db_xref="MIM:607727" /translation="MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDD SERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQL RDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMAD MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHL LSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCI QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQG SDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKA DVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKT RQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNH SPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIK DLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEIT RLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYS DSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIG LVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYS IAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLE LKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLK EIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVVECLGKLTLIDPETLLPRLKG YLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTF NSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFEC MYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLV EPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISS NPELAAIFESIQKDSSSTNLESMDTS" BASE COUNT 1266 a 786 c 901 g 1229 t ORIGIN 1 ggcgtcgcgc tgcgaccctg gaagcgggag ccgccgcgag cgagaggagg agctccagtg 61 gcggcggcgg cggcggcagc ggcagcgggc agcagctcca gcagcgccag caggcgggat 121 cgaggccgtc aacatggcga gcgcctcgta ccacatttcc aatttgctgg aaaaaatgac 181 atccagcgac aaggacttta ggtttatggc tacaaatgat ttgatgacgg aactgcagaa 241 agattccatc aagttggatg atgatagtga aaggaaagta gtgaaaatga ttttgaagtt 301 attggaagat aaaaatggag aggtacagaa tttagctgtc aaatgtcttg gtcctttagt 361 gagtaaagtg aaagaatacc aagtagagac aattgtagat accctctgca ctaacatgct 421 ttctgataaa gaacaacttc gagacatttc aagtattggt cttaaaacag taattggaga 481 acttcctcca gcttccagtg gctctgcatt agctgctaat gtatgtaaaa agattactgg 541 acgtcttaca agtgcaatag caaaacagga agatgtctct gttcagctag aagccttgga 601 tattatggct gatatgttga gcaggcaagg aggacttctt gttaatttcc atccttcaat 661 tctgacctgt ctacttcccc agttgaccag ccctagactt gcagtgagga aaagaaccat 721 tatcgctctt ggccatctgg ttatgagctg tggaaatata gtttttgtag atcttattga 781 acatctgttg tcagagttgt ccaaaaatga ttctatgtca acaacaagaa cctacataca 841 atgtattgct gctattagta ggcaagctgg tcatagaata ggtgaatacc ttgagaagat 901 aattcctttg gtggtaaaat tttgcaatgt agatgatgat gaattaagag agtactgtat 961 tcaagccttt gaatcatttg taagaagatg tcctaaggaa gtatatcctc atgtttctac 1021 cattataaat atttgtctta aatatcttac ctatgatcca aattataatt acgatgatga 1081 agatgaagat gaaaatgcaa tggatgctga tggtggtgat gatgatgatc aagggagtga 1141 tgatgaatac agtgatgatg atgacatgag ttggaaagtg agacgtgcag ctgcgaagtg 1201 cttggatgct gtagttagca caaggcatga aatgcttcca gaattctaca agaccgtctc 1261 tcctgcacta atatccagat ttaaagagcg tgaagagaat gtaaaggcag atgtttttca 1321 cgcatacctt tctcttttga agcaaactcg tcctgtacaa agttggctat gtgaccctga 1381 tgcaatggag cagggagaaa cacctttaac aatgcttcag agtcaggttc ccaacattgt 1441 taaagctctt cacaaacaga tgaaagaaaa aagtgtgaag acccgacagt gttgttttaa 1501 catgttaact gagctggtaa atgtattacc tggggcccta actcaacaca ttcctgtact 1561 tgtaccagga atcattttct cactgaatga taaatcaagc tcatcgaatt tgaagatcga 1621 tgctttgtca tgtctatacg taatcctctg taaccattct cctcaagtct tccatcctca 1681 cgttcaggct ttggttcctc cagtggtggc ttgtgttgga gacccatttt acaaaattac 1741 atctgaagca cttcttgtta ctcaacagct tgtcaaagta attcgtcctt tagatcagcc 1801 ttcctcgttt gatgcaactc cttatatcaa agatctattt acctgtacca ttaagagatt 1861 aaaagcagct gacattgatc aggaagtcaa ggaaagggct atttcctgta tgggacaaat 1921 tatttgcaac cttggagaca atttgggttc tgacttgcct aatacacttc agattttctt 1981 ggagagacta aagaatgaaa ttaccaggtt aactacagta aaggcattga cactgattgc 2041 tgggtcacct ttgaagatag atttgaggcc tgttctggga gaaggggttc ctatccttgc 2101 ttcatttctt agaaaaaacc agagagcttt gaaactgggt actctttctg cccttgatat 2161 tctaataaaa aactatagtg acagcttgac agctgccatg attgatgcag ttctagatga 2221 gctcccacct cttatcagcg aaagtgatat gcatgtttca caaatggcca tcagttttct 2281 taccactttg gcaaaagtat atccctcctc cctttcaaag ataagtggat ccattctcaa 2341 tgaacttatt ggacttgtga gatcaccctt attgcagggg ggagctctta gtgccatgct 2401 agactttttc caagctctgg ttgtcactgg aacaaataat ttaggataca tggatttgtt 2461 gcgcatgctg actggtccag tttactctca gagcacagct cttactcata agcagtctta 2521 ttattccatt gccaaatgtg tagctgccct tactcgagca tgccctaaag agggaccagc 2581 tgtagtaggt cagtttattc aagatgtcaa gaactcaagg tctacagatt ccattcgtct 2641 cttagctcta ctttctcttg gagaagttgg gcatcatatt gacttaagtg gacagttgga 2701 actaaaatct gtaatactag aagctttctc atctcctagt gaagaagtca aatcagctgc 2761 atcctatgca ttaggcagca ttagtgtggg caaccttcct gaatatctac cgtttgtcct 2821 gcaagaaata actagtcaac ccaaaaggca gtatctttta cttcattcct tgaaggaaat 2881 tattagctct gcatcagtgg tgggccttaa accatatgtt gaaaacatct gggccttatt 2941 actaaagcac tgtgagtgtg cagaggaagg aaccagaaat gttgttgttg aatgtctagg 3001 aaaactcact ctaattgatc cagaaactct ccttccacgg cttaaggggt acttgatatc 3061 aggctcatca tatgcccgaa gctcagtggt tacggctgtg aaatttacaa tttctgacca 3121 tccacaacct attgatccac tgttaaagaa ctgcataggt gatttcctaa aaactttgga 3181 agacccagat ttgaatgtga gaagagtagc cttggtcaca tttaattcag cagcacataa 3241 caagccatca ttaataaggg atctattgga tactgttctt ccacatcttt acaatgaaac 3301 aaaagttaga aaggagctta taagagaggt agaaatgggt ccatttaaac atacggttga 3361 tgatggtctg gatattagaa aggcagcatt tgagtgtatg tacacacttc tagacagttg 3421 tcttgataga cttgatatct ttgaatttct aaatcatgtt gaagatggtt tgaaggacca 3481 ttatgatatt aagatgctga catttttaat gttggtgaga ctgtctaccc tttgtccaag 3541 tgcagtactg cagaggttgg accgacttgt tgagccatta cgtgcaacat gtacaactaa 3601 ggtaaaggca aactcagtaa agcaggagtt tgaaaaacaa gatgaattaa agcgatctgc 3661 catgagagca gtagcagcac tactaaccat tccagaagca gagaagagtc cactgatgag 3721 tgaattccag tcacagatca gttctaaccc tgagctggcg gctatctttg aaagtatcca 3781 gaaagattca tcatctacta acttggaatc aatggacact agttagatgt ttgttcacca 3841 tggggaccat tacatatgac catacaatgc actgaattga caggttaatc ataagacatg 3901 gaaagagaag tgtctaaaag cttcaaaatg ttccactttt ttttccttca tggagactgt 3961 ttgtttggct ttcttccatt gttgtttttg tagcatttat ttcagaaatg tgtatttcca 4021 taatccagag gttgtaaaac cactagtgtt ttagtggtta cagcaacatt tgaaatggaa 4081 actaaaagtt aggattttat ggagtatgga gatagggtcc agtatctatt taccctgtaa 4141 tgtttaggat taaaatgtta aaatttaaaa aaaaaaaaaa aa //