LOCUS BC050341 4182 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cullin-associated and neddylation-dissociated 1, mRNA
(cDNA clone MGC:51033 IMAGE:5265409), complete cds.
ACCESSION BC050341
VERSION BC050341.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4182)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4182)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: p Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361793.
FEATURES Location/Qualifiers
source 1..4182
/db_xref="H-InvDB:HIT000053417"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51033 IMAGE:5265409"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4182
/gene="CAND1"
/gene_synonym="KIAA0829"
/gene_synonym="TIP120"
/gene_synonym="TIP120A"
/db_xref="GeneID:55832"
/db_xref="HGNC:HGNC:30688"
/db_xref="MIM:607727"
CDS 134..3826
/gene="CAND1"
/gene_synonym="KIAA0829"
/gene_synonym="TIP120"
/gene_synonym="TIP120A"
/codon_start=1
/product="cullin-associated and neddylation-dissociated 1"
/protein_id="AAH50341.1"
/db_xref="GeneID:55832"
/db_xref="HGNC:HGNC:30688"
/db_xref="MIM:607727"
/translation="MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDD
SERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQL
RDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMAD
MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHL
LSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCI
QAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQG
SDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKA
DVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKT
RQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNH
SPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIK
DLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEIT
RLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYS
DSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIG
LVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYS
IAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLE
LKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLK
EIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVVECLGKLTLIDPETLLPRLKG
YLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTF
NSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFEC
MYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLV
EPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISS
NPELAAIFESIQKDSSSTNLESMDTS"
BASE COUNT 1266 a 786 c 901 g 1229 t
ORIGIN
1 ggcgtcgcgc tgcgaccctg gaagcgggag ccgccgcgag cgagaggagg agctccagtg
61 gcggcggcgg cggcggcagc ggcagcgggc agcagctcca gcagcgccag caggcgggat
121 cgaggccgtc aacatggcga gcgcctcgta ccacatttcc aatttgctgg aaaaaatgac
181 atccagcgac aaggacttta ggtttatggc tacaaatgat ttgatgacgg aactgcagaa
241 agattccatc aagttggatg atgatagtga aaggaaagta gtgaaaatga ttttgaagtt
301 attggaagat aaaaatggag aggtacagaa tttagctgtc aaatgtcttg gtcctttagt
361 gagtaaagtg aaagaatacc aagtagagac aattgtagat accctctgca ctaacatgct
421 ttctgataaa gaacaacttc gagacatttc aagtattggt cttaaaacag taattggaga
481 acttcctcca gcttccagtg gctctgcatt agctgctaat gtatgtaaaa agattactgg
541 acgtcttaca agtgcaatag caaaacagga agatgtctct gttcagctag aagccttgga
601 tattatggct gatatgttga gcaggcaagg aggacttctt gttaatttcc atccttcaat
661 tctgacctgt ctacttcccc agttgaccag ccctagactt gcagtgagga aaagaaccat
721 tatcgctctt ggccatctgg ttatgagctg tggaaatata gtttttgtag atcttattga
781 acatctgttg tcagagttgt ccaaaaatga ttctatgtca acaacaagaa cctacataca
841 atgtattgct gctattagta ggcaagctgg tcatagaata ggtgaatacc ttgagaagat
901 aattcctttg gtggtaaaat tttgcaatgt agatgatgat gaattaagag agtactgtat
961 tcaagccttt gaatcatttg taagaagatg tcctaaggaa gtatatcctc atgtttctac
1021 cattataaat atttgtctta aatatcttac ctatgatcca aattataatt acgatgatga
1081 agatgaagat gaaaatgcaa tggatgctga tggtggtgat gatgatgatc aagggagtga
1141 tgatgaatac agtgatgatg atgacatgag ttggaaagtg agacgtgcag ctgcgaagtg
1201 cttggatgct gtagttagca caaggcatga aatgcttcca gaattctaca agaccgtctc
1261 tcctgcacta atatccagat ttaaagagcg tgaagagaat gtaaaggcag atgtttttca
1321 cgcatacctt tctcttttga agcaaactcg tcctgtacaa agttggctat gtgaccctga
1381 tgcaatggag cagggagaaa cacctttaac aatgcttcag agtcaggttc ccaacattgt
1441 taaagctctt cacaaacaga tgaaagaaaa aagtgtgaag acccgacagt gttgttttaa
1501 catgttaact gagctggtaa atgtattacc tggggcccta actcaacaca ttcctgtact
1561 tgtaccagga atcattttct cactgaatga taaatcaagc tcatcgaatt tgaagatcga
1621 tgctttgtca tgtctatacg taatcctctg taaccattct cctcaagtct tccatcctca
1681 cgttcaggct ttggttcctc cagtggtggc ttgtgttgga gacccatttt acaaaattac
1741 atctgaagca cttcttgtta ctcaacagct tgtcaaagta attcgtcctt tagatcagcc
1801 ttcctcgttt gatgcaactc cttatatcaa agatctattt acctgtacca ttaagagatt
1861 aaaagcagct gacattgatc aggaagtcaa ggaaagggct atttcctgta tgggacaaat
1921 tatttgcaac cttggagaca atttgggttc tgacttgcct aatacacttc agattttctt
1981 ggagagacta aagaatgaaa ttaccaggtt aactacagta aaggcattga cactgattgc
2041 tgggtcacct ttgaagatag atttgaggcc tgttctggga gaaggggttc ctatccttgc
2101 ttcatttctt agaaaaaacc agagagcttt gaaactgggt actctttctg cccttgatat
2161 tctaataaaa aactatagtg acagcttgac agctgccatg attgatgcag ttctagatga
2221 gctcccacct cttatcagcg aaagtgatat gcatgtttca caaatggcca tcagttttct
2281 taccactttg gcaaaagtat atccctcctc cctttcaaag ataagtggat ccattctcaa
2341 tgaacttatt ggacttgtga gatcaccctt attgcagggg ggagctctta gtgccatgct
2401 agactttttc caagctctgg ttgtcactgg aacaaataat ttaggataca tggatttgtt
2461 gcgcatgctg actggtccag tttactctca gagcacagct cttactcata agcagtctta
2521 ttattccatt gccaaatgtg tagctgccct tactcgagca tgccctaaag agggaccagc
2581 tgtagtaggt cagtttattc aagatgtcaa gaactcaagg tctacagatt ccattcgtct
2641 cttagctcta ctttctcttg gagaagttgg gcatcatatt gacttaagtg gacagttgga
2701 actaaaatct gtaatactag aagctttctc atctcctagt gaagaagtca aatcagctgc
2761 atcctatgca ttaggcagca ttagtgtggg caaccttcct gaatatctac cgtttgtcct
2821 gcaagaaata actagtcaac ccaaaaggca gtatctttta cttcattcct tgaaggaaat
2881 tattagctct gcatcagtgg tgggccttaa accatatgtt gaaaacatct gggccttatt
2941 actaaagcac tgtgagtgtg cagaggaagg aaccagaaat gttgttgttg aatgtctagg
3001 aaaactcact ctaattgatc cagaaactct ccttccacgg cttaaggggt acttgatatc
3061 aggctcatca tatgcccgaa gctcagtggt tacggctgtg aaatttacaa tttctgacca
3121 tccacaacct attgatccac tgttaaagaa ctgcataggt gatttcctaa aaactttgga
3181 agacccagat ttgaatgtga gaagagtagc cttggtcaca tttaattcag cagcacataa
3241 caagccatca ttaataaggg atctattgga tactgttctt ccacatcttt acaatgaaac
3301 aaaagttaga aaggagctta taagagaggt agaaatgggt ccatttaaac atacggttga
3361 tgatggtctg gatattagaa aggcagcatt tgagtgtatg tacacacttc tagacagttg
3421 tcttgataga cttgatatct ttgaatttct aaatcatgtt gaagatggtt tgaaggacca
3481 ttatgatatt aagatgctga catttttaat gttggtgaga ctgtctaccc tttgtccaag
3541 tgcagtactg cagaggttgg accgacttgt tgagccatta cgtgcaacat gtacaactaa
3601 ggtaaaggca aactcagtaa agcaggagtt tgaaaaacaa gatgaattaa agcgatctgc
3661 catgagagca gtagcagcac tactaaccat tccagaagca gagaagagtc cactgatgag
3721 tgaattccag tcacagatca gttctaaccc tgagctggcg gctatctttg aaagtatcca
3781 gaaagattca tcatctacta acttggaatc aatggacact agttagatgt ttgttcacca
3841 tggggaccat tacatatgac catacaatgc actgaattga caggttaatc ataagacatg
3901 gaaagagaag tgtctaaaag cttcaaaatg ttccactttt ttttccttca tggagactgt
3961 ttgtttggct ttcttccatt gttgtttttg tagcatttat ttcagaaatg tgtatttcca
4021 taatccagag gttgtaaaac cactagtgtt ttagtggtta cagcaacatt tgaaatggaa
4081 actaaaagtt aggattttat ggagtatgga gatagggtcc agtatctatt taccctgtaa
4141 tgtttaggat taaaatgtta aaatttaaaa aaaaaaaaaa aa
//