LOCUS BC049837 3520 bp mRNA linear HUM 22-APR-2003 DEFINITION Homo sapiens phytoceramidase, alkaline, mRNA (cDNA clone IMAGE:5214265), partial cds. ACCESSION BC049837 VERSION BC049837.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3520) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3520) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: k Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923526. FEATURES Location/Qualifiers source 1..3520 /db_xref="H-InvDB:HIT000099087" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5214265" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 1079 a 686 c 672 g 1083 t ORIGIN 1 cgcctgggcg gcggcggcgg cggcgtgatg gctccggccg cggaccgaga gggctactgg 61 ggccccacga cctccacgct ggactggtgc gaggagaact actccgtgac ctggtacatc 121 gccgagttct ggaatacagt gagtaacctg atcatgatta tacctccaat gttcggtgca 181 gttcagagtg ttagagacgg tctggaaaag cggtacattg cttcttattt agcactcaca 241 gaagtacttc agatttgaga aaagagcaca taactatggc taaaagatgg gatttgtaat 301 ctctggagtt ttttacttca agtctgagga tccaaactga ctaagtgaag taaagaaata 361 agcagctatt ggatgaactc ccaatgatat acagctgttg catatttgtg tactgcatgt 421 ttgaatgttt caagatcaag aactcagtaa actaccatct gctttttacc ttagttctat 481 tcagtttaat agtaaccaca gtttacctta aggtaaaaga gccgatattc catcaggtca 541 tgtatggaat gttggtcttt acattagtac ttcgatctat ttatattgtt acatgggttt 601 atccatggct tagaggactg ggttatacat cattgggtat atttttattg ggatttttat 661 tttggaatat agataacata ttttgtgagt cactgaggaa ctttcgaaag aaggtaccac 721 ctatcatagg tattaccaca caatttcatg catggtggca tattttaact ggccttggtt 781 cctatcttca catccttttc agtttgtata caagaacact ttacctgaga tataggccaa 841 aagtgaagtt tctctttgga atctggccag tgatcctgtt tgagcctctc aggaagcatt 901 gatgaatcat tccaccaaga aaacaaacaa gcacctacca tagacctggc agaataaata 961 aggaaatcct taaagatcta caagttcaaa tatgtcatga ccatcacagc agaggagtga 1021 ctttctgact aatgctgcca cccacacaga gaataaggag tagggcctgc tgggtgttta 1081 gctcatggct ttatcttatt tgtccccctc ctcctttcac gctccagttt ataaagaaac 1141 agagatgatg tgtgtgtatg cctcaaatgc agaaacagtt gggcttttct taacaggtta 1201 acagtttgtg ctggttataa gaaattaacc ttcttttctt tttgccaagg gttgcatgtg 1261 aattatacct ttcttaatat ttgattaaat aatgcagtca gctaagagcc aacaaaaccc 1321 catatccaga tagttagctg tgagccagca ctcagctgtg tcagatttga ttaatattgt 1381 attaatctca tggatggttc tcaaaggtaa aaaaagagag agaaagagag agagctagct 1441 gtgggattct gtgtagttct tcactatctg ttccagggct agtcggagga tcataagcaa 1501 gctcagacct gcccccagtt cagtacttga ccacatccca ggatttatgg tgtctgtcta 1561 tggccacagc caaccagaat gagtgggtca tcttataacc tttctgaagc tccatgagga 1621 catgtataga atgctgcacc ttcagccagc tctgctctga tctttgcaga tctttaagtt 1681 gtcactgttt ctacggctag acaaatatga ctggtggtct agactaccca tagttcatcc 1741 tcctcacata acttatttga agttgtcagg gaatgtcatt acactctgat ttttaaaatt 1801 atgcagtatt ttccagttct cagagaggtc atggttgtgc ccagggaagt gtgttgcatt 1861 aactaaagct aaaattatca gaatcctatt tacataaagc atattaaaat atctgctcct 1921 taattttctg aaggaaatag atgtaagttt ctgctacttg aaacctacag aaccgacaaa 1981 aattagggtg ctaaaaaaat gacagtgaaa tctcatcgta aggcagctag ttctaatttg 2041 catttgaatg tataacaaat tgcatcactt ttcacaaact taacacctgc ctggagtaaa 2101 aatctgattt gacccctctg ctcatgtttc atcatatttg tagctctgca tcatttagca 2161 tttttatgac tttttttgct ttatataaat tattgtaaaa tccagattgt ttttaccaca 2221 tgatgacgtg actcaggatt aaatcctgag ctacagtttc aaaaggaaaa tcatttcttt 2281 cttatgcaaa gatggtaaaa cactgttgtc attttttcca gtattcaata agtagccttt 2341 gtacaaattt aaaaccaaaa actattctgt tgtttttctt cacctactag ccttagtttt 2401 taaccaagta tccaaggatg tcaacttgac atccttccct tagcatgcca acaagccatt 2461 agactgattc ttccacctat ttttatgaac ctccaggaag aaaaacactt gccaaaacat 2521 taagagaact ttgattctgc cttaagaggg tataaaacta aaccatttga aggcacagcc 2581 cataagacta tacttgattt tgccccaaga ttctgacttc tggctacatt tcacctgcag 2641 ttacctgggc tatcggccgt gatacatttt ttaattcatt tgttttccac cattatattt 2701 ttatactttt cagttagata tacttctgca taaagagtat atatacagtg taggataaag 2761 gcatatcgta catggcaatg ctgttaaaca tggtaagact gaggttctgc aggattaaag 2821 tcagattaag ggtacagaaa gcacaccttg atactgaggc catttagagc aatttgttta 2881 atgagtggtt cagccatcac caccagtggc cacctgttca ataaaattgc ctagcaccac 2941 agtggagagt catctacacc ccaaggtgag ctgtaagact ggccaattct ttgaagacct 3001 ttttttctgt tgggagaatg gaaagcagaa agggaagcca ggctctttaa tgttccaagt 3061 cagctgtgcc tcacacaagg ctctcctttt agctactaag taacatactc aagactttgt 3121 atctgtgcag cattttatgg aaatcactgg tgacctatag gatattacta aattatttca 3181 atagctttat ttttttccta cttggattct aggtggacat tacagagttg aattcctcac 3241 taccccctcc cgctgtcatt tgttttattg gaaaacttca tgttaactag agtgtacaaa 3301 aagtctgttt cctgctgagc caatagtgat ttgtttgcat atcacctaat gtgaaaagtg 3361 ctcatctgtg aactctacag caaattatat tttagaaaat actttgtgag gccgggcatg 3421 gtggcagagc gagactccgt ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //