LOCUS BC049837 3520 bp mRNA linear HUM 22-APR-2003
DEFINITION Homo sapiens phytoceramidase, alkaline, mRNA (cDNA clone
IMAGE:5214265), partial cds.
ACCESSION BC049837
VERSION BC049837.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3520)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3520)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923526.
FEATURES Location/Qualifiers
source 1..3520
/db_xref="H-InvDB:HIT000099087"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5214265"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1079 a 686 c 672 g 1083 t
ORIGIN
1 cgcctgggcg gcggcggcgg cggcgtgatg gctccggccg cggaccgaga gggctactgg
61 ggccccacga cctccacgct ggactggtgc gaggagaact actccgtgac ctggtacatc
121 gccgagttct ggaatacagt gagtaacctg atcatgatta tacctccaat gttcggtgca
181 gttcagagtg ttagagacgg tctggaaaag cggtacattg cttcttattt agcactcaca
241 gaagtacttc agatttgaga aaagagcaca taactatggc taaaagatgg gatttgtaat
301 ctctggagtt ttttacttca agtctgagga tccaaactga ctaagtgaag taaagaaata
361 agcagctatt ggatgaactc ccaatgatat acagctgttg catatttgtg tactgcatgt
421 ttgaatgttt caagatcaag aactcagtaa actaccatct gctttttacc ttagttctat
481 tcagtttaat agtaaccaca gtttacctta aggtaaaaga gccgatattc catcaggtca
541 tgtatggaat gttggtcttt acattagtac ttcgatctat ttatattgtt acatgggttt
601 atccatggct tagaggactg ggttatacat cattgggtat atttttattg ggatttttat
661 tttggaatat agataacata ttttgtgagt cactgaggaa ctttcgaaag aaggtaccac
721 ctatcatagg tattaccaca caatttcatg catggtggca tattttaact ggccttggtt
781 cctatcttca catccttttc agtttgtata caagaacact ttacctgaga tataggccaa
841 aagtgaagtt tctctttgga atctggccag tgatcctgtt tgagcctctc aggaagcatt
901 gatgaatcat tccaccaaga aaacaaacaa gcacctacca tagacctggc agaataaata
961 aggaaatcct taaagatcta caagttcaaa tatgtcatga ccatcacagc agaggagtga
1021 ctttctgact aatgctgcca cccacacaga gaataaggag tagggcctgc tgggtgttta
1081 gctcatggct ttatcttatt tgtccccctc ctcctttcac gctccagttt ataaagaaac
1141 agagatgatg tgtgtgtatg cctcaaatgc agaaacagtt gggcttttct taacaggtta
1201 acagtttgtg ctggttataa gaaattaacc ttcttttctt tttgccaagg gttgcatgtg
1261 aattatacct ttcttaatat ttgattaaat aatgcagtca gctaagagcc aacaaaaccc
1321 catatccaga tagttagctg tgagccagca ctcagctgtg tcagatttga ttaatattgt
1381 attaatctca tggatggttc tcaaaggtaa aaaaagagag agaaagagag agagctagct
1441 gtgggattct gtgtagttct tcactatctg ttccagggct agtcggagga tcataagcaa
1501 gctcagacct gcccccagtt cagtacttga ccacatccca ggatttatgg tgtctgtcta
1561 tggccacagc caaccagaat gagtgggtca tcttataacc tttctgaagc tccatgagga
1621 catgtataga atgctgcacc ttcagccagc tctgctctga tctttgcaga tctttaagtt
1681 gtcactgttt ctacggctag acaaatatga ctggtggtct agactaccca tagttcatcc
1741 tcctcacata acttatttga agttgtcagg gaatgtcatt acactctgat ttttaaaatt
1801 atgcagtatt ttccagttct cagagaggtc atggttgtgc ccagggaagt gtgttgcatt
1861 aactaaagct aaaattatca gaatcctatt tacataaagc atattaaaat atctgctcct
1921 taattttctg aaggaaatag atgtaagttt ctgctacttg aaacctacag aaccgacaaa
1981 aattagggtg ctaaaaaaat gacagtgaaa tctcatcgta aggcagctag ttctaatttg
2041 catttgaatg tataacaaat tgcatcactt ttcacaaact taacacctgc ctggagtaaa
2101 aatctgattt gacccctctg ctcatgtttc atcatatttg tagctctgca tcatttagca
2161 tttttatgac tttttttgct ttatataaat tattgtaaaa tccagattgt ttttaccaca
2221 tgatgacgtg actcaggatt aaatcctgag ctacagtttc aaaaggaaaa tcatttcttt
2281 cttatgcaaa gatggtaaaa cactgttgtc attttttcca gtattcaata agtagccttt
2341 gtacaaattt aaaaccaaaa actattctgt tgtttttctt cacctactag ccttagtttt
2401 taaccaagta tccaaggatg tcaacttgac atccttccct tagcatgcca acaagccatt
2461 agactgattc ttccacctat ttttatgaac ctccaggaag aaaaacactt gccaaaacat
2521 taagagaact ttgattctgc cttaagaggg tataaaacta aaccatttga aggcacagcc
2581 cataagacta tacttgattt tgccccaaga ttctgacttc tggctacatt tcacctgcag
2641 ttacctgggc tatcggccgt gatacatttt ttaattcatt tgttttccac cattatattt
2701 ttatactttt cagttagata tacttctgca taaagagtat atatacagtg taggataaag
2761 gcatatcgta catggcaatg ctgttaaaca tggtaagact gaggttctgc aggattaaag
2821 tcagattaag ggtacagaaa gcacaccttg atactgaggc catttagagc aatttgttta
2881 atgagtggtt cagccatcac caccagtggc cacctgttca ataaaattgc ctagcaccac
2941 agtggagagt catctacacc ccaaggtgag ctgtaagact ggccaattct ttgaagacct
3001 ttttttctgt tgggagaatg gaaagcagaa agggaagcca ggctctttaa tgttccaagt
3061 cagctgtgcc tcacacaagg ctctcctttt agctactaag taacatactc aagactttgt
3121 atctgtgcag cattttatgg aaatcactgg tgacctatag gatattacta aattatttca
3181 atagctttat ttttttccta cttggattct aggtggacat tacagagttg aattcctcac
3241 taccccctcc cgctgtcatt tgttttattg gaaaacttca tgttaactag agtgtacaaa
3301 aagtctgttt cctgctgagc caatagtgat ttgtttgcat atcacctaat gtgaaaagtg
3361 ctcatctgtg aactctacag caaattatat tttagaaaat actttgtgag gccgggcatg
3421 gtggcagagc gagactccgt ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//