LOCUS BC049217 2260 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, mRNA (cDNA clone IMAGE:5500425), partial cds. ACCESSION BC049217 VERSION BC049217.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2260) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2260) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: n Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13514830. FEATURES Location/Qualifiers source 1..2260 /db_xref="H-InvDB:HIT000099067" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5500425" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>2260 /gene="DDX10" /gene_synonym="HRH-J8" /db_xref="GeneID:1662" /db_xref="MIM:601235" CDS 26..>2260 /gene="DDX10" /gene_synonym="HRH-J8" /codon_start=1 /product="DDX10 protein" /protein_id="AAH49217.1" /db_xref="GeneID:1662" /db_xref="MIM:601235" /translation="MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKP EWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGL ALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEV LRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQM LVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWV HEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFC RLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDC PEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDV QKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAP RVRFLQKMQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRL EGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAKGSQAPSLPNTSEAQKIKEVPTQFL DRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPSKSSIKKKMTKVAEAKKVMKRNF KVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKFDKEEY KKKKK" misc_feature 167..1579 /gene="DDX10" /gene_synonym="HRH-J8" /note="SrmB; Region: Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]" /db_xref="CDD:COG0513" BASE COUNT 773 a 435 c 528 g 524 t ORIGIN 1 ccgagctgtc gccgccgccg ccgcaatggg caaaacggcc aactctccgg gttcgggagc 61 ccgacccgac ccggtgcgga gcttcaatcg ctggaagaaa aaacacagcc ataggcagaa 121 caaaaagaag cagttgagga agcaactgaa gaaacccgaa tggcaggtcg agcgcgagag 181 tatcagccgc ctcatgcaga actatgaaaa gataaatgta aatgaaatca caagattttc 241 agattttccc ttgtccaaaa aaacattgaa aggtttgcaa gaagctcagt accgtttggt 301 gactgagata cagaagcaga ccattggatt ggctttgcaa ggtaaagatg tacttggagc 361 ggccaaaact ggatctggca agactctggc ttttcttgtt ccagtgctgg aagccttata 421 tcgtctgcaa tggacttcaa cagatgggct gggggttctc ataatatcac ctacgagaga 481 actggcctat cagacctttg aggttctccg aaaagtagga aagaatcatg acttctcagc 541 tggtctcatc attggtggaa aggatctaaa acacgaagct gagaggatca acaacataaa 601 tatactcgtg tgcacaccag gtcggcttct tcaacacatg gatgaaacag tatcttttca 661 tgctaccgac ctccaaatgt tagttcttga tgaagcagat agaatcttgg atatgggctt 721 tgctgatacc atgaatgctg ttattgaaaa tctccccaag aaacgtcaga ctttactttt 781 ctcagcaaca caaactaaat ctgtaaagga ccttgcacgc ttgagtttga aaaaccctga 841 gtatgtctgg gttcatgaaa aagcaaaata tagcacccct gccactttgg aacagaacta 901 catagtctgt gagctgcagc aaaaaataag tgtgctgtat tcctttttga gaagccatct 961 gaagaagaag agcattgtat ttttttccag ttgcaaagag gtccagtatc tgtaccgagt 1021 gttttgccgg ctacgtcctg gtgtttctat ccttgcactc catggtcgac agcagcaaat 1081 gagaagaatg gaagtctata atgagtttgt ccgtaagaga gctgcagtac tctttgctac 1141 tgatattgca gccaggggtc tggatttccc ggccgtgaat tgggttcttc agtttgattg 1201 tcctgaggat gccaacacat atattcacag agcaggtaga actgccaggt acaaagagga 1261 tggtgaagct ttgctaattt tgctaccctc agaaaaagct atggtgcagc agcttcttca 1321 gaagaaagta cctgtgaagg aaatcaaaat caatccagaa aaacttatag atgtccagaa 1381 aaaattggaa tctattttag ctcaagatca agatttaaaa gaaagagctc aaaggtgttt 1441 cgtctcctat gtacgatctg tatatctgat gaaggataaa gaagtatttg atgtgagcaa 1501 gttacctata cctgaatatg ccctgtctct tggtcttgct gtggcaccac gcgtaagatt 1561 tcttcagaaa atgcagaaac aacccaccaa agaattggta aggagccaag ccgataaagt 1621 aattgagcca agggctccct ccctcaccaa tgacgaagtg gaagaattta gagcctactt 1681 caatgagaaa atgtccatcc ttcaaaaagg tggaaaaaga ctcgaaggga cagagcacag 1741 acaggataat gatactggta atgaagaaca ggaagaagaa gaagacgatg aagaagaaat 1801 ggaagagaaa ctggcaaaag caaaaggatc tcaagcccca tctcttccta acaccagtga 1861 ggcacagaag atcaaggaag ttcctacaca gttcttggac agagatgagg aggaagaaga 1921 tgctgatttc ttgaaggtga agcggcataa tgtgtttgga ttggacctta aagacgagaa 1981 aacattacag aagaaagaac cttctaaatc cagcatcaag aaaaaaatga ccaaagttgc 2041 agaagcaaaa aaagtaatga agagaaattt taaagtgaat aagaagataa catttactga 2101 tgaaggggag ttggttcagc agtggccaca aatgcagaaa tctgccatca aggatgctga 2161 ggaagatgat gacacaggtg gtatcaactt acataaagca aaggaaagac ttcaggaaga 2221 ggacaaattt gacaaagaag aatataaaaa aaaaaaaaaa //