LOCUS BC047932 2214 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens vacuolar protein sorting 4 homolog A (S. cerevisiae), mRNA (cDNA clone MGC:49835 IMAGE:5753632), complete cds. ACCESSION BC047932 VERSION BC047932.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2214) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2214) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: h Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 17865806. FEATURES Location/Qualifiers source 1..2214 /db_xref="H-InvDB:HIT000053280" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49835 IMAGE:5753632" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2214 /gene="VPS4A" /gene_synonym="FLJ22197" /gene_synonym="SKD1" /gene_synonym="SKD2" /gene_synonym="VPS4" /gene_synonym="VPS4-1" /db_xref="GeneID:27183" /db_xref="HGNC:HGNC:13488" /db_xref="MIM:609982" CDS 107..1420 /gene="VPS4A" /gene_synonym="FLJ22197" /gene_synonym="SKD1" /gene_synonym="SKD2" /gene_synonym="VPS4" /gene_synonym="VPS4-1" /codon_start=1 /product="vacuolar protein sorting 4 homolog A (S. cerevisiae)" /protein_id="AAH47932.1" /db_xref="GeneID:27183" /db_xref="HGNC:HGNC:13488" /db_xref="MIM:609982" /translation="MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIK YEAHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGD NPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPW RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQ HKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWV LDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADI SIIVRDSLMQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSPGDPGAMEMTWMDV PGDKLLEPVVCMSDMLRSLATTRPTVNADDLLKVKKFSEDFGQES" BASE COUNT 570 a 609 c 613 g 422 t ORIGIN 1 cgcccaccgc cgggcttccc gcgccggacc cagtacctcg gctccccggg gccggaccga 61 ggccgcaagc agcgccgcgg ggtgtggggc ggacccagga gatgaaatga caacgtcaac 121 cctccagaaa gccattgatc tggtgacgaa agccacagag gaggacaaag ccaagaacta 181 cgaggaggcg ctgcggctgt accagcatgc ggtggagtac ttcctccacg ctatcaagta 241 tgaggcccac agcgacaagg ccaaggagag cattcgagcc aagtgcgtgc agtacctaga 301 ccgggccgag aagctgaagg attatttacg aagcaaagag aaacacggca agaagccagt 361 caaagagaac cagagtgagg gcaagggcag tgacagtgac agtgaagggg ataatccgga 421 gaaaaagaaa ctgcaagaac agctgatggg tgccgtcgtg atggagaagc ccaacatacg 481 gtggaacgac gtggccgggc tggagggggc caaggaggcc ctcaaagaag ctgtcatttt 541 gccaatcaaa ttcccacact tgttcacagg caagcgcacc ccctggcggg ggattctgct 601 gttcggaccc cctggcacag ggaaatccta cctggccaaa gccgtggcaa cagaggccaa 661 caactccacc ttcttctctg tgtcctcctc agatctgatg tccaagtggc tgggggagag 721 tgaaaagctg gtcaagaacc tgtttgagct ggccaggcag cacaagccct ccatcatctt 781 catcgatgag gtggattccc tctgcgggtc ccgaaatgaa aatgagagtg aggccgcccg 841 gaggatcaaa acggagttct tggtccagat gcagggggtg gggaataaca atgatgggac 901 tctggttctt ggagccacaa acatcccatg ggtgttggat tcggccatca ggaggaggtt 961 tgaaaaacga atttatatcc ccttgccgga ggaagctgcc cgcgcccaga tgttccggtt 1021 gcatctcggg agcactcccc acaacctcac ggatgcaaac atccacgagc tggcccggaa 1081 gacggaaggc tactcgggcg cggacatcag catcatcgtg cgggactctc tcatgcagcc 1141 cgtgaggaag gtgcagtcgg ccacacactt caaaaaggtc tgtggcccct ctcgcaccaa 1201 ccccagcatg atgattgatg acctcctgac tccatgctca ccaggggacc caggagccat 1261 ggagatgact tggatggatg tccctgggga caaactctta gagcctgtgg tttgcatgtc 1321 ggacatgctg cggtctctgg ccaccacccg gcccacggtg aatgcagacg acctcctgaa 1381 agtgaagaaa ttctcagagg actttgggca agagagttaa aagctgcttc acttgggcaa 1441 tggtgaaggt gggaggttga ttggggcaaa tccaggcact ccccatgtca acagccagac 1501 agggctccag ggcttgtccc agtcaataca gagttccctc tgctgtctgg ccgtctgcca 1561 gggagccaga aggaagggcc ttgcagccac agagacactc cactgccctg gggcacacag 1621 tggacactgc tcttcctact tcctcctctc ctggatgctc atcagctcct tctgcctccc 1681 cccctttttt ttccatcttt tgttccccta aattaatgct gcttggattt tcatcttatt 1741 tataaagata aaatcacctg gaagtgtcaa ggagtggggc ggggtggcgg gggagaagca 1801 gccgtgctgc caggtcaccc agacctccag acagccggct agccccactg cccgttcctt 1861 ttacgcccaa gttttgctcc ttgagagcag attggctgat gcccctgcaa ccccagccca 1921 agctctgcct caaagaccga gtgacataag ccattcccac cctcctaggt tcacatccag 1981 ggctgtgtct tccttggggg aggagatggt gtcgtttaga tcagggtaag gcagtcaggc 2041 gggtgttcac cactgccttt tcttcctctg agcgtgagaa cactgaaccc agccactgcc 2101 cctgggtccc tgtcctggaa atggtctaat aaatcctttt cccttctgga gctaaaaaaa 2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //