LOCUS BC047900 1503 bp mRNA linear HUM 05-NOV-2003 DEFINITION Homo sapiens bromodomain, testis-specific, mRNA (cDNA clone IMAGE:5169324), partial cds. ACCESSION BC047900 VERSION BC047900.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1503) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1503) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: c Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4502452. FEATURES Location/Qualifiers source 1..1503 /db_xref="H-InvDB:HIT000098827" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5169324" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1503 /gene="BRDT" /gene_synonym="BRD6" /db_xref="GeneID:676" /db_xref="MIM:602144" CDS 115..>1503 /gene="BRDT" /gene_synonym="BRD6" /codon_start=1 /product="BRDT protein" /protein_id="AAH47900.1" /db_xref="GeneID:676" /db_xref="MIM:602144" /translation="MSLPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLW KHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMF SNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAK EKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTT TPATSAVKASSEFSPTFTENSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHC SEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDA YKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTD ITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNK KKEKSKKKKKKKK" misc_feature 193..519 /gene="BRDT" /gene_synonym="BRD6" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" misc_feature 925..1245 /gene="BRDT" /gene_synonym="BRD6" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" BASE COUNT 532 a 294 c 287 g 390 t ORIGIN 1 ccctccccga ccccatcaac atcgtgcgac agtccgggca gttgagaagg ccaccccgct 61 tcgtgcctgc agcccaggac atgtacttgt agacaggatt caaagcagtt aagaatgtct 121 ctgccaagtc gacaaacagc tattattgtt aaccctcctc caccagaata tataaatact 181 aagaaaaatg ggcgattgac aaatcaactt cagtatctac aaaaagttgt cctaaaggat 241 ttatggaagc atagtttttc atggcccttt caacgtcctg tggatgctgt gaaactacag 301 ttgcctgatt attataccat tataaaaaac ccaatggatt taaatacaat taagaagcgc 361 ttggagaata aatattatgc gaaggcttca gaatgtatag aagacttcaa tacaatgttc 421 tcaaattgtt atttatataa caagcctgga gatgacattg ttcttatggc acaagctcta 481 gagaagctgt ttatgcagaa attatctcag atgccacaag aagagcaagt tgtgggtgtt 541 aaggaaagaa tcaagaaagg cactcaacag aatatagctg tttcttctgc taaagaaaaa 601 tcatcaccca gcgcaacaga aaaagtattt aagcagcaag aaattccttc tgtatttcct 661 aagacatcta tttctccctt gaacgtggta cagggagctt cagtcaactc cagttcacaa 721 actgcggccc aagttacaaa aggtgtgaag aggaaagcag atacaacaac tcctgcaact 781 tcagcagtta aagcaagtag tgaattttct ccaacattca cagaaaactc agtggcactg 841 ccacctataa aagaaaatat gccaaagaat gttttgccag attctcagca acaatataat 901 gttgtgaaga ctgttaaagt aactgaacaa ttaaggcact gtagtgagat tcttaaagaa 961 atgcttgcaa agaaacattt ttcatatgca tggccctttt ataatcctgt tgacgttaat 1021 gctttgggac tccataacta ctatgacgtt gtcaaaaatc cgatggatct tggaactatt 1081 aaggagaaaa tggataacca agaatataag gatgcataca aatttgcggc agatgttaga 1141 ttaatgttca tgaattgcta caagtacaat cctccagatc acgaagttgt gacaatggca 1201 agaatgcttc aggatgtttt cgaaacgcat ttttcaaaga tcccgattga acctgttgag 1261 agtatgcctt tatgttacat caaaacagat atcacagaaa ccactggtag agagaacact 1321 aatgaagcct cctctgaagg gaactcttct gatgattctg aagatgagcg agttaagcgt 1381 cttgcaaagc ttcaggagca gcttaaagct gtacatcaac agctccaggt tttgtcccaa 1441 gtacctttcc gtaagctaaa taaaaagaaa gagaagtcta aaaaaaaaaa aaaaaaaaaa 1501 aaa //