LOCUS       BC047695                2502 bp    mRNA    linear   HUM 09-MAR-2007
DEFINITION  Homo sapiens perforin 1 (pore forming protein), mRNA (cDNA clone
            MGC:51909 IMAGE:5752084), complete cds.
ACCESSION   BC047695
VERSION     BC047695.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2502)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 98 Row: e Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 45935369.
FEATURES             Location/Qualifiers
     source          1..2502
                     /db_xref="H-InvDB:HIT000098757"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:51909 IMAGE:5752084"
                     /tissue_type="Brain, Lung, Testis, adult, pooled whole"
                     /clone_lib="NIH_MGC_115"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2502
                     /gene="PRF1"
                     /gene_synonym="FLH2"
                     /gene_synonym="HPLH2"
                     /gene_synonym="P1"
                     /gene_synonym="PFP"
                     /db_xref="GeneID:5551"
                     /db_xref="HGNC:HGNC:9360"
                     /db_xref="MIM:170280"
     CDS             47..1714
                     /gene="PRF1"
                     /gene_synonym="FLH2"
                     /gene_synonym="HPLH2"
                     /gene_synonym="P1"
                     /gene_synonym="PFP"
                     /codon_start=1
                     /product="perforin 1 (pore forming protein)"
                     /protein_id="AAH47695.2"
                     /db_xref="GeneID:5551"
                     /db_xref="HGNC:HGNC:9360"
                     /db_xref="MIM:170280"
                     /translation="MAARLLLLGILLLLLPLPVPAPCHTAARSECKRSHKFVPGAWLA
                     GEGVDVTSLRRSGSFPVDTQRFLRPDGTCTLCENALQEGTLQRLPLALTNWRAQGSGC
                     QRHVTRAKVSSTEAVARDAARSIRNDWKVGLDVTPKPTSNVHVSVAGSHSQAANFAAQ
                     KTHQDQYSFSTDTVECRFYSFHVVHTPPLHPDFKRALGDLPHHFNASTQPAYLRLISN
                     YGTHFIRAVELGGRISALTALRTCELALEGLTDNEVEDCLTVEAQVNIGIHGSISAEA
                     KACEEKKKKHKMTASFHQTYRERHSEVVGGHHTSINDLLFGIQAGPEQYSAWVNSLPG
                     SPGLVDYTLEPLHVLLDSQDPRREALRRALSQYLTDRARWRDCSRPCPPGRQKSPRDP
                     CQCVCHGSAVTTQDCCPRQRGLAQLEVTFIQAWGLWGDWFTATDAYVKLFFGGQELRT
                     STVWDNNNPIWSVRLDFGDVLLATGGPLRLQVWDQDSGRDDDLLGTCDQAPKSGSHEV
                     RCNLNHGHLKFRYHARCLPHLGGGTCLDYVPQMLLGEPPGNRSGAVW"
BASE COUNT          571 a          756 c          685 g          490 t
ORIGIN      
        1 ggatatccat ctgtgtagcc gcttctctat acgggattcc agctccatgg cagcccgtct
       61 gctcctcctg ggcatccttc tcctgctgct gcccctgccc gtccctgccc cgtgccacac
      121 agccgcacgc tcagagtgca agcgcagcca caagttcgtg cctggtgcat ggctggccgg
      181 ggagggtgtg gacgtgacca gcctccgccg ctcgggctcc ttcccagtgg acacacaaag
      241 gttcctgcgg cccgacggca cctgcaccct ctgtgaaaat gccctacagg agggcaccct
      301 ccagcgcctg cctctggcgc tcaccaactg gcgggcccag ggctctggct gccagcgcca
      361 tgtaaccagg gccaaagtca gctccactga agctgtggcc cgggatgcgg ctcgtagcat
      421 ccgcaacgac tggaaggtcg ggctggacgt gactcctaag cccaccagca atgtgcatgt
      481 gtctgtggcc ggctcacact cacaggcagc caactttgca gcccagaaga cccaccagga
      541 ccagtacagc ttcagcactg acacggtgga gtgccgcttc tacagtttcc atgtggtaca
      601 cactcccccg ctgcaccctg acttcaagag ggccctcggg gacctgcccc accacttcaa
      661 cgcctccacc cagcccgcct acctcaggct tatctccaac tacggcaccc acttcatccg
      721 ggctgtggag ctgggtggcc gcatatcggc cctcactgcc ctgcgcacct gcgagctggc
      781 cctggaaggg ctcacggaca acgaggtgga ggactgcctg actgtcgagg cccaggtcaa
      841 cataggcatc cacggcagca tctctgccga agccaaggcc tgtgaggaga agaagaagaa
      901 gcacaagatg acggcctcct tccaccaaac ctaccgggag cgccattcgg aagtggttgg
      961 cggccatcac acctccatta acgacctgct gttcgggatc caggccgggc ccgagcagta
     1021 ctcagcctgg gtaaactcgc tgcccggcag ccctggcctg gtggactaca ccctggaacc
     1081 cctgcacgtg ctgctggaca gccaggaccc gcggcgggag gcactgagga gggccctgag
     1141 tcagtacctg acggacaggg ctcgctggag ggactgcagc cggccgtgcc caccagggcg
     1201 gcagaagagc ccccgagacc catgccagtg tgtgtgccat ggctcagcgg tcaccaccca
     1261 ggactgctgc cctcggcaga ggggcctggc ccagctggag gtgaccttca tccaagcatg
     1321 gggcctgtgg ggggactggt tcactgccac ggatgcctat gtgaagctct tctttggtgg
     1381 ccaggagctg aggacgagca ccgtgtggga caataacaac cccatctggt cagtgcggct
     1441 ggattttggg gatgtgctcc tggccacagg ggggcccctg aggttgcagg tctgggatca
     1501 ggactctggc agggacgatg acctccttgg cacctgtgat caggctccca agtctggttc
     1561 ccatgaggtg agatgcaacc tgaatcatgg ccacctaaaa ttccgctatc atgccaggtg
     1621 cttgccccac ctgggaggag gcacctgcct ggactatgtc ccccaaatgc ttctggggga
     1681 gcctccagga aaccggagtg gggccgtgtg gtgagaacag tgagcttgga aaggaccagt
     1741 atgcttggac tgaaggggtt ctcacagtgg gagccagggc tgtcttcgta ttcccattag
     1801 accaagctta tccaacccga ggcccgcatg cggcccagga tggctttgaa tgcggcccaa
     1861 cgcaaattcg caaactttct taaaacatta tgagtttctt tttgctattt tttttttttt
     1921 tttagctcat cggctatcgt tagtgctagt ggattttaca tgtggcccaa cacaattctt
     1981 cttccaacgt ggcccagaga agccaaaaga ttggatacgc atcagacaga tggaaaaggg
     2041 agattcagac tgtttttcag ggaggtggct gggtttacac gctaatcccg attcaccctg
     2101 tccaaactgc ctaagccctc cgccattctc aagccctgca gtcacagcta cacagatcac
     2161 agcttcagcc aggagctggg cagaaggcca agaggctgtt cccaccaggc tgctcagggc
     2221 tggtctttta ggacccttcc cttgagccct ctatggtgtg gcaaagcctt cattgcctta
     2281 actggagccc catcagctcc agctgctctg tcttctttgc ccacaatgct ttgcccctga
     2341 gacaaatgga ggcctgtcct gacctgtctc accatgtaca tagcttgata aagggccaat
     2401 aaatatgatg ttatggtgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//