LOCUS BC047695 2502 bp mRNA linear HUM 09-MAR-2007 DEFINITION Homo sapiens perforin 1 (pore forming protein), mRNA (cDNA clone MGC:51909 IMAGE:5752084), complete cds. ACCESSION BC047695 VERSION BC047695.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2502) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2502) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: e Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 45935369. FEATURES Location/Qualifiers source 1..2502 /db_xref="H-InvDB:HIT000098757" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51909 IMAGE:5752084" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2502 /gene="PRF1" /gene_synonym="FLH2" /gene_synonym="HPLH2" /gene_synonym="P1" /gene_synonym="PFP" /db_xref="GeneID:5551" /db_xref="HGNC:HGNC:9360" /db_xref="MIM:170280" CDS 47..1714 /gene="PRF1" /gene_synonym="FLH2" /gene_synonym="HPLH2" /gene_synonym="P1" /gene_synonym="PFP" /codon_start=1 /product="perforin 1 (pore forming protein)" /protein_id="AAH47695.2" /db_xref="GeneID:5551" /db_xref="HGNC:HGNC:9360" /db_xref="MIM:170280" /translation="MAARLLLLGILLLLLPLPVPAPCHTAARSECKRSHKFVPGAWLA GEGVDVTSLRRSGSFPVDTQRFLRPDGTCTLCENALQEGTLQRLPLALTNWRAQGSGC QRHVTRAKVSSTEAVARDAARSIRNDWKVGLDVTPKPTSNVHVSVAGSHSQAANFAAQ KTHQDQYSFSTDTVECRFYSFHVVHTPPLHPDFKRALGDLPHHFNASTQPAYLRLISN YGTHFIRAVELGGRISALTALRTCELALEGLTDNEVEDCLTVEAQVNIGIHGSISAEA KACEEKKKKHKMTASFHQTYRERHSEVVGGHHTSINDLLFGIQAGPEQYSAWVNSLPG SPGLVDYTLEPLHVLLDSQDPRREALRRALSQYLTDRARWRDCSRPCPPGRQKSPRDP CQCVCHGSAVTTQDCCPRQRGLAQLEVTFIQAWGLWGDWFTATDAYVKLFFGGQELRT STVWDNNNPIWSVRLDFGDVLLATGGPLRLQVWDQDSGRDDDLLGTCDQAPKSGSHEV RCNLNHGHLKFRYHARCLPHLGGGTCLDYVPQMLLGEPPGNRSGAVW" BASE COUNT 571 a 756 c 685 g 490 t ORIGIN 1 ggatatccat ctgtgtagcc gcttctctat acgggattcc agctccatgg cagcccgtct 61 gctcctcctg ggcatccttc tcctgctgct gcccctgccc gtccctgccc cgtgccacac 121 agccgcacgc tcagagtgca agcgcagcca caagttcgtg cctggtgcat ggctggccgg 181 ggagggtgtg gacgtgacca gcctccgccg ctcgggctcc ttcccagtgg acacacaaag 241 gttcctgcgg cccgacggca cctgcaccct ctgtgaaaat gccctacagg agggcaccct 301 ccagcgcctg cctctggcgc tcaccaactg gcgggcccag ggctctggct gccagcgcca 361 tgtaaccagg gccaaagtca gctccactga agctgtggcc cgggatgcgg ctcgtagcat 421 ccgcaacgac tggaaggtcg ggctggacgt gactcctaag cccaccagca atgtgcatgt 481 gtctgtggcc ggctcacact cacaggcagc caactttgca gcccagaaga cccaccagga 541 ccagtacagc ttcagcactg acacggtgga gtgccgcttc tacagtttcc atgtggtaca 601 cactcccccg ctgcaccctg acttcaagag ggccctcggg gacctgcccc accacttcaa 661 cgcctccacc cagcccgcct acctcaggct tatctccaac tacggcaccc acttcatccg 721 ggctgtggag ctgggtggcc gcatatcggc cctcactgcc ctgcgcacct gcgagctggc 781 cctggaaggg ctcacggaca acgaggtgga ggactgcctg actgtcgagg cccaggtcaa 841 cataggcatc cacggcagca tctctgccga agccaaggcc tgtgaggaga agaagaagaa 901 gcacaagatg acggcctcct tccaccaaac ctaccgggag cgccattcgg aagtggttgg 961 cggccatcac acctccatta acgacctgct gttcgggatc caggccgggc ccgagcagta 1021 ctcagcctgg gtaaactcgc tgcccggcag ccctggcctg gtggactaca ccctggaacc 1081 cctgcacgtg ctgctggaca gccaggaccc gcggcgggag gcactgagga gggccctgag 1141 tcagtacctg acggacaggg ctcgctggag ggactgcagc cggccgtgcc caccagggcg 1201 gcagaagagc ccccgagacc catgccagtg tgtgtgccat ggctcagcgg tcaccaccca 1261 ggactgctgc cctcggcaga ggggcctggc ccagctggag gtgaccttca tccaagcatg 1321 gggcctgtgg ggggactggt tcactgccac ggatgcctat gtgaagctct tctttggtgg 1381 ccaggagctg aggacgagca ccgtgtggga caataacaac cccatctggt cagtgcggct 1441 ggattttggg gatgtgctcc tggccacagg ggggcccctg aggttgcagg tctgggatca 1501 ggactctggc agggacgatg acctccttgg cacctgtgat caggctccca agtctggttc 1561 ccatgaggtg agatgcaacc tgaatcatgg ccacctaaaa ttccgctatc atgccaggtg 1621 cttgccccac ctgggaggag gcacctgcct ggactatgtc ccccaaatgc ttctggggga 1681 gcctccagga aaccggagtg gggccgtgtg gtgagaacag tgagcttgga aaggaccagt 1741 atgcttggac tgaaggggtt ctcacagtgg gagccagggc tgtcttcgta ttcccattag 1801 accaagctta tccaacccga ggcccgcatg cggcccagga tggctttgaa tgcggcccaa 1861 cgcaaattcg caaactttct taaaacatta tgagtttctt tttgctattt tttttttttt 1921 tttagctcat cggctatcgt tagtgctagt ggattttaca tgtggcccaa cacaattctt 1981 cttccaacgt ggcccagaga agccaaaaga ttggatacgc atcagacaga tggaaaaggg 2041 agattcagac tgtttttcag ggaggtggct gggtttacac gctaatcccg attcaccctg 2101 tccaaactgc ctaagccctc cgccattctc aagccctgca gtcacagcta cacagatcac 2161 agcttcagcc aggagctggg cagaaggcca agaggctgtt cccaccaggc tgctcagggc 2221 tggtctttta ggacccttcc cttgagccct ctatggtgtg gcaaagcctt cattgcctta 2281 actggagccc catcagctcc agctgctctg tcttctttgc ccacaatgct ttgcccctga 2341 gacaaatgga ggcctgtcct gacctgtctc accatgtaca tagcttgata aagggccaat 2401 aaatatgatg ttatggtgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //