LOCUS BC045628 3529 bp mRNA linear HTC 09-SEP-2005 DEFINITION Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1, mRNA (cDNA clone IMAGE:5267481), with apparent retained intron. ACCESSION BC045628 VERSION BC045628.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3529) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3529) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 63 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3529 /db_xref="H-InvDB:HIT000098084" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5267481" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 793 a 1036 c 1046 g 654 t ORIGIN 1 ggcgctcggg gcctgctgcg gtgcccgcgg gtctgtgccg ctgaagtggg cacccctcct 61 ccagcctcgt gaggacagcg gccgtccctc ggcgcggggc tggtctgcca cgggcgcctc 121 cccgtgtccc ctgggccgcc gcacggcctc tgccacggtc ggccctttca gtccctcaga 181 agcacttggg tttaaagtct ccatgtcatt aaaacaacga gcaggtagac gaggcggccg 241 gagcgtgtcc gccgcagtct gggctgtgaa cgggcccctc gcccgcccct cctgagccgg 301 agctgctccg gaggacgaga agctctcctc gtggaaagtc ttactaacct ggcccggcgc 361 ccaggtctga ggccttcccc ccggctgagg atgattgaaa gagcctgtgt gccgccatcc 421 aacgtcgtta ctgtcgcaga cggcggctac cgcgtgatgg atggagcagc ggactcagcc 481 gtgcaaatca ttcatcgggg tcagtgcctg gtgccgtggg accgcggcgt gggggtttca 541 acgcgtaaaa atcgcaccgc acgccacccg gagacggagc ctgctgtcgg cagggcgggc 601 cgggctgcgg ggccgggtgc tccggaggcc gctgaagagg cagctcccca acgccaagag 661 cccgtccagc cccaggcccg gagctgcttc ctcagggagc ccaccctgtg acgtgcccga 721 ggtgaggcgg ccaccagagg ccgcgtccaa acctgtgcgc caggcagcgt gtggctgagg 781 ctcagacgtc gactcacgcg tttcagttcc tctcgagaaa actcgctgcc acctggtctc 841 agccagcgac cgcgagggac agtgagaaag gcgagagcgg gcacacgccc cccatcaacc 901 tggtgtggcc gggggaaggc gagagcgggc acacgccccc catgaacctg gtacggccgg 961 gggaaggcga gagcgggcac acgcccccca tgaacctggt acggccgggg gaaggcgaga 1021 gcgggcacac gccccccatg aacctggtgc ggccggggga aggcgagaac gggcacacgc 1081 cccccatcaa cctggtaccg ccgggggaag gcgagaacgg gcacacgccc cccatcaacc 1141 tggtgcggcc gggggaaggc gagagcgggc acacgccccc catcaacctg gtaccgccgg 1201 gggaaggcga gagcgggcac acgcccccca tcgacctggt accgccaggg gaaggcgaga 1261 gcgggcacac gccccccatg aacctggtgc ggccggggga aggcgagagc gggcacacgc 1321 cccccatcga cctggtaccg ccgggggaag gcgagagcgg gcacacgccc cccatcgacc 1381 tggtaccgcc gggggaaggc gagagcgggc acacgccccc catcgacctg gtaccgccgg 1441 gggaaggcga gagcgggcac acgcccccca tgaacctggt accgccgggg gaaggcgaga 1501 gcgggcacac gccccccatc gacctggtac cgccggggga aggcgagagc gggcacatgc 1561 cccccatcga cctggtaccg ccgggggaag gcgagagcgg gcacacgccc cccatgaacc 1621 tggtgcggcc gggggaaggc gagagcgggc acacgccccc catgaacctg gtaccgccgg 1681 gggaaagcga gagcgggcac acgcccccca tcaacctgta aatgaaataa tacgaaatga 1741 cctctccagc acgagcaccc actcctagtt gccacattgg agcactcagt tcagcagggg 1801 tatgctgact tcagcagaca aagacttttg aataaataaa ctgaactcac acctggtacc 1861 actcagaacc tccaactgac tgaatgccag gagctgaaca ttaatatgtg caaagattgg 1921 ctctccaaca agaaggaaag cagggaggaa gggagaccac tgtgtcacct ggaggagaag 1981 tcatctcatg acaacagaag ggaggtggcc gggctgagca cgggagaccc accgtgcagg 2041 ggcctttcat gggaacggcc cacacgcagt ttgaccccac gcccagccct tctggcaccc 2101 ctggggttca atactggaag tgccttattt aaccagacca tcagggcatc atagaattga 2161 gcattgaatt tgctactgta ggagtatttt taggagcaga aactgcaaac acatttcatt 2221 gtgaggtttt accctctgta tgaatgaaga gaacgctgga aggctgcgag aggactctag 2281 tatgagtctc caacatttgg aacgtttcct gggctgtcac gtacactcct gctgccttac 2341 acagtgcatt ttagaatctt ccagtctgtc atctcagctc ttttgtaaca tgcttccctt 2401 gtctgcgcgg ttgaaaccgt aggcttgttc atagtcgcat gctcgcatct ttgtttttaa 2461 tctggcttcg aacatagcac aagtaacttg aatagcacat caataggtta ctggacaaaa 2521 gcagaaaaac ctgttacagg atagcctgca tttgcatgtg tgtacatatc taggcatcta 2581 tttatgtata aataataaca gagccgacgt gtcctcgccc aggagggctt ccctgtcagc 2641 aataaccggc atccgttttg gaacctgcgt ctggggctcc agtcgctgct cttgctggcg 2701 tccatcgccg cctcggacgg ccgtgcattt tctcgtctca cgcagttcga ggaggaccct 2761 agaaagccag gagctgtgat tgacagtagc tgtaggttac cagacggcaa cattagaaag 2821 tgattgtaaa taacatgcaa cctaagtgta atatatttgt tcagttataa gatgattgtt 2881 tcacagaagc cttaccactc tctgcttcat ctaagaaaac caataccaaa aacgccactt 2941 taatgctcag ccctgcgttg tgtgttttca gatgagttac tgttaacagg taggtttgtg 3001 taggccttgc tgggcactct gtacaattag ttgcttatta cgtatgatta ctcgcagcga 3061 tctattgttc catataacca aaaagcatgg tttattcatt gaaacacggt tgacctgaac 3121 tcgtgcctta ggaattaatg cccccttatg gaacctgcct gaattgcacc tgcgggtgga 3181 ggctccggct gtgaagtcac tgaacagaac gtcgctgatg gagaaagggc tcccgcagaa 3241 ggaacggcct gtaccgtgcg ctccggcaca atcgcgtctc ttgtgtctca ctcacggaaa 3301 gaaacaacct gaaggccatc ccgtcggtct gcacgtaacc gtgaagacgt gtggccgcgt 3361 cccacctgcg gctgggtacc ctgcacccgg cactgtagga gtcacgtgca gcctttctca 3421 ggggactgtc attgaaaagg aaacgtttga tgtctgtgtc agctgtcttt gtagttagga 3481 aatagatcca ataaagccgt atttttttgc tggaaaaaaa aaaaaaaaa //