LOCUS BC045563 1668 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens sorting nexin 32, mRNA (cDNA clone MGC:57276 IMAGE:4815203), complete cds. ACCESSION BC045563 VERSION BC045563.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1668) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1668) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 106 Row: b Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749488. FEATURES Location/Qualifiers source 1..1668 /db_xref="H-InvDB:HIT000052937" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57276 IMAGE:4815203" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1668 /gene="SNX32" /db_xref="GeneID:254122" /db_xref="HGNC:HGNC:26423" CDS 77..1288 /gene="SNX32" /codon_start=1 /product="sorting nexin 32" /protein_id="AAH45563.1" /db_xref="GeneID:254122" /db_xref="HGNC:HGNC:26423" /translation="METYAEVGKEGKPSCASVDLQGDSSLQVEISDAVSERDKVKFTV QTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAGLIIPPAPPRPDFEASREKLQ KLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDHNFFVF LEYGQDLSVRGKNRKELLGGFLRNIVKSADEALITGMSGLKEVDDFFEHERTFLLEYH TRIRDACLRADRVMRAHKCLADDYIPISAALSSLGTQEVNQLRTSFLKLAELFERLRK LEGRVASDEDLKLSDMLRYYMRDSQAAKDLLYRRLRALADYENANKALDKARTRNREV RPAESHQQLCCQRFERLSDSAKQELMDFKSRRVSSFRKNLIELAELELKHAKASTLIL RNTLVALKGEP" BASE COUNT 397 a 487 c 480 g 304 t ORIGIN 1 agtttctcgg gcgagttacg gggacgacct gcgggagcgc gcgggcagtg gccggacgct 61 gaagcccagg agagcgatgg agacgtatgc ggaggttggc aaggagggca agccttcctg 121 tgcatcggtg gatctgcagg gagacagctc cttacaggtg gagatttctg acgcagtgag 181 tgagcgggac aaggtgaaat tcactgttca aacaaagagc tgcctccctc acttcgccca 241 gaccgagttc tcagtcgtgc ggcagcacga ggagttcatc tggctgcatg atgcctacgt 301 ggagaatgag gagtacgccg gcctcatcat ccccccagcc cctccgaggc cagactttga 361 ggcttcgagg gaaaagctac agaaattggg cgagggggac agctctgtca ctcgggaaga 421 gtttgccaag atgaagcagg agctggaagc ggagtacctg gccatcttta agaagacagt 481 tgcgatgcac gaagtctttc tgcagcgcct ggcggcccac cccaccctgc gtcgagacca 541 caacttcttt gtgtttttgg aatatggaca ggatctgagt gtccggggga agaacaggaa 601 ggagctcctc ggagggtttc tgaggaatat tgtgaagtcc gcggatgaag ccctcatcac 661 gggcatgtca gggctcaagg aggtggatga cttctttgag catgagagga ccttcctgtt 721 ggagtatcac acccgtatcc gagatgcctg cctgcgggcc gaccgcgtca tgcgcgccca 781 caagtgcctg gcagacgatt atatccctat ctcagctgcg ctgagcagtc tgggaacaca 841 ggaagtcaac cagctaagga cgagcttcct caaattggca gagctctttg aacggctgag 901 gaagctggag ggccgggtgg cttccgatga ggacctgaag ctgtcagaca tgctgaggta 961 ctacatgcgt gactcacagg cagccaagga cctgctgtac cggcggctgc gggcactggc 1021 cgactacgag aatgccaaca aggcgctgga caaggcgcgc accaggaacc gggaggtgcg 1081 gcccgccgag agccaccagc agctgtgctg ccaacgcttc gagcgcctct ccgactccgc 1141 caagcaagag ctcatggact tcaagtcccg ccgggtctcc tcttttcgaa agaatctcat 1201 tgagctggca gagctggagc tcaaacacgc caaggccagc accctgattc tccggaacac 1261 ccttgttgcc ctaaaggggg agccttagag tagccagagc tcagccagac cctaatctgg 1321 gatctccagt gaccagggta tcccagaccc ctctctccgg caagatgtct ccttccctag 1381 cagtgccact agccacaccc tcactctgcc ccacatcctc tcagggaaag cccaaacccc 1441 ctatcaccac caccacaggt gccaggccct gcaagacaca gggcagcatg ggcatcataa 1501 ctggccacag tcagcagagc cccagggacc ctgacacctc tccccaggaa gctgaggaac 1561 agcctctacc ctcacccata gccctgaagg aatcatagct cacttgatcc cggcctgttc 1621 tccttcgcaa ataaaaaccc tggttttgta gcaaaaaaaa aaaaaaaa //