LOCUS BC045563 1668 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens sorting nexin 32, mRNA (cDNA clone MGC:57276
IMAGE:4815203), complete cds.
ACCESSION BC045563
VERSION BC045563.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1668)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1668)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749488.
FEATURES Location/Qualifiers
source 1..1668
/db_xref="H-InvDB:HIT000052937"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57276 IMAGE:4815203"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1668
/gene="SNX32"
/db_xref="GeneID:254122"
/db_xref="HGNC:HGNC:26423"
CDS 77..1288
/gene="SNX32"
/codon_start=1
/product="sorting nexin 32"
/protein_id="AAH45563.1"
/db_xref="GeneID:254122"
/db_xref="HGNC:HGNC:26423"
/translation="METYAEVGKEGKPSCASVDLQGDSSLQVEISDAVSERDKVKFTV
QTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAGLIIPPAPPRPDFEASREKLQ
KLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDHNFFVF
LEYGQDLSVRGKNRKELLGGFLRNIVKSADEALITGMSGLKEVDDFFEHERTFLLEYH
TRIRDACLRADRVMRAHKCLADDYIPISAALSSLGTQEVNQLRTSFLKLAELFERLRK
LEGRVASDEDLKLSDMLRYYMRDSQAAKDLLYRRLRALADYENANKALDKARTRNREV
RPAESHQQLCCQRFERLSDSAKQELMDFKSRRVSSFRKNLIELAELELKHAKASTLIL
RNTLVALKGEP"
BASE COUNT 397 a 487 c 480 g 304 t
ORIGIN
1 agtttctcgg gcgagttacg gggacgacct gcgggagcgc gcgggcagtg gccggacgct
61 gaagcccagg agagcgatgg agacgtatgc ggaggttggc aaggagggca agccttcctg
121 tgcatcggtg gatctgcagg gagacagctc cttacaggtg gagatttctg acgcagtgag
181 tgagcgggac aaggtgaaat tcactgttca aacaaagagc tgcctccctc acttcgccca
241 gaccgagttc tcagtcgtgc ggcagcacga ggagttcatc tggctgcatg atgcctacgt
301 ggagaatgag gagtacgccg gcctcatcat ccccccagcc cctccgaggc cagactttga
361 ggcttcgagg gaaaagctac agaaattggg cgagggggac agctctgtca ctcgggaaga
421 gtttgccaag atgaagcagg agctggaagc ggagtacctg gccatcttta agaagacagt
481 tgcgatgcac gaagtctttc tgcagcgcct ggcggcccac cccaccctgc gtcgagacca
541 caacttcttt gtgtttttgg aatatggaca ggatctgagt gtccggggga agaacaggaa
601 ggagctcctc ggagggtttc tgaggaatat tgtgaagtcc gcggatgaag ccctcatcac
661 gggcatgtca gggctcaagg aggtggatga cttctttgag catgagagga ccttcctgtt
721 ggagtatcac acccgtatcc gagatgcctg cctgcgggcc gaccgcgtca tgcgcgccca
781 caagtgcctg gcagacgatt atatccctat ctcagctgcg ctgagcagtc tgggaacaca
841 ggaagtcaac cagctaagga cgagcttcct caaattggca gagctctttg aacggctgag
901 gaagctggag ggccgggtgg cttccgatga ggacctgaag ctgtcagaca tgctgaggta
961 ctacatgcgt gactcacagg cagccaagga cctgctgtac cggcggctgc gggcactggc
1021 cgactacgag aatgccaaca aggcgctgga caaggcgcgc accaggaacc gggaggtgcg
1081 gcccgccgag agccaccagc agctgtgctg ccaacgcttc gagcgcctct ccgactccgc
1141 caagcaagag ctcatggact tcaagtcccg ccgggtctcc tcttttcgaa agaatctcat
1201 tgagctggca gagctggagc tcaaacacgc caaggccagc accctgattc tccggaacac
1261 ccttgttgcc ctaaaggggg agccttagag tagccagagc tcagccagac cctaatctgg
1321 gatctccagt gaccagggta tcccagaccc ctctctccgg caagatgtct ccttccctag
1381 cagtgccact agccacaccc tcactctgcc ccacatcctc tcagggaaag cccaaacccc
1441 ctatcaccac caccacaggt gccaggccct gcaagacaca gggcagcatg ggcatcataa
1501 ctggccacag tcagcagagc cccagggacc ctgacacctc tccccaggaa gctgaggaac
1561 agcctctacc ctcacccata gccctgaagg aatcatagct cacttgatcc cggcctgttc
1621 tccttcgcaa ataaaaaccc tggttttgta gcaaaaaaaa aaaaaaaa
//