LOCUS BC042540 1790 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cat eye syndrome chromosome region, candidate 5, mRNA (cDNA clone MGC:16996 IMAGE:4342582), complete cds. ACCESSION BC042540 VERSION BC042540.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1790) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1790) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: k Column: 16. FEATURES Location/Qualifiers source 1..1790 /db_xref="H-InvDB:HIT000052707" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16996 IMAGE:4342582" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1790 /gene="CECR5" /db_xref="GeneID:27440" /db_xref="HGNC:HGNC:1843" CDS 13..1284 /gene="CECR5" /codon_start=1 /product="cat eye syndrome chromosome region, candidate 5" /protein_id="AAH42540.1" /db_xref="GeneID:27440" /db_xref="HGNC:HGNC:1843" /translation="MAAWGCVAALGAARGLCWRAARAAAGLQGRPARRCYAVGPAQSP PTFGFLLDIDGVLVRGHRVIPAALKAFRRLVNSQGQLRVPVVFVTNAGNILQHSKAQE LSALLGCEVDADQVILSHSPMKLFSEYHEKRMLVSGQGPVMENAQGLGFRNVVTVDEL RMAFPLLDMVDLERRLKTTPLPRNDFPRIEGVLLLGEPVRWETSLQLIMDVLLSNGSP GAGLATPPYPHLPVLASNMDLLWMAEAKMPRFGHGTFLLCLETIYQKVTGKELRYEGL MGKPSILTYQYAEDLIRRQAERRGWAAPIRKLYAVGDNPMSDVYGANLFHQYLQKATH DGAPELGAGGTRQQQPSASQSCISILVCTGVYNPRNPQSTEPVLGGGEPPFHGHRDLC FSPGLMEASHVVNDVNEAVQLVFRKEGWALE" BASE COUNT 346 a 493 c 560 g 391 t ORIGIN 1 ggcgacggcc ggatggctgc gtggggctgt gtggctgcgc tcggcgcggc gcgtgggctt 61 tgctggcggg cggcgcgcgc ggctgcgggg ctccagggcc gccccgcccg caggtgctat 121 gctgtgggcc ccgctcagag cccacccacc tttgggttcc tgttggacat cgatggagtg 181 cttgtgcggg gccacagagt gatccctgct gctctgaaag ccttccgaag gctggtgaac 241 tcccaggggc agctgcgggt gcccgtggtt tttgttacaa atgctggtaa catcttacaa 301 cacagcaaag cccaggagct gtcagccctg ctggggtgcg aggtggatgc agaccaagtt 361 atcctctctc acagccccat gaagctcttc tccgagtacc atgagaagcg gatgctggtg 421 tctggacagg ggcccgtgat ggaaaatgcc cagggactgg gcttccgaaa tgtcgtcacc 481 gtggatgagc tgcggatggc ctttcctctg cttgacatgg tggacctgga gcggcggcta 541 aagaccacgc ccctcccgag gaatgacttc ccccgcattg aaggggtgct cctcctaggg 601 gagccggtcc gctgggagac cagcctgcag ctgatcatgg atgtcctcct cagcaatggg 661 agccctgggg ctggcctggc aacacccccc tacccccacc tccccgtcct agccagcaac 721 atggatctcc tgtggatggc tgaagccaag atgcccaggt ttggacatgg cacctttctg 781 ctgtgcctgg aaaccattta ccagaaagtg acgggcaagg agctgagata cgagggcctg 841 atgggcaaac ccagcatcct cacttaccag tatgccgagg acctgatcag gcgacaggcg 901 gagaggcggg gctgggccgc ccccatccgg aagctctatg ctgtgggtga taaccctatg 961 tctgacgtat acggcgccaa cctgttccac cagtacctgc agaaggcaac gcatgatggg 1021 gcgccagaac taggggccgg gggcacacgg cagcaacagc cctcagcaag ccagagctgc 1081 atctccatcc tggtgtgtac aggcgtctac aatcccagga acccacagtc cacggagcct 1141 gtccttggag gaggggagcc tccattccac gggcaccgag acttatgctt cagtccaggg 1201 ctcatggagg cctcccacgt ggtgaatgac gtgaatgagg ctgtgcagct ggtcttccgc 1261 aaggagggct gggctttgga gtgagggcag tgcggtggag gtgagggggt gagcctggac 1321 ctgtgggcga gtcccattgg ctgggctctg gcctgatcac tgggctcagg tcagggcttg 1381 gttcccttgc cacccttctt gctgccccat gagtgtggca ttactggtca cttggaagaa 1441 gacagtgact ctttttccct gctgggtagc attttgtatg gaacggttgg aattttctgg 1501 gcccagttcc cacgtgcctt tcgtggcagt ctaacctcag gccattctct tcccctgtgt 1561 gcctcagtgt ccttctcatt tcagtaggga cttctgaaat gggggaggca gtgtggaata 1621 ctgtggatgt ctgtgcagag cctttgccgg cactgaaggc atgcagcctg tcggcagagt 1681 gtcttaacac cagatgctac tttttactgt attgtagttt attgcccgga gatgtggggc 1741 ttttttttta aataaaataa tcataataaa tgttaaaaaa aaaaaaaaaa //