LOCUS BC042147 1965 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, mRNA (cDNA clone MGC:52352 IMAGE:3619576), complete cds. ACCESSION BC042147 VERSION BC042147.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1965) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1965) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: b Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25777649. FEATURES Location/Qualifiers source 1..1965 /db_xref="H-InvDB:HIT000052661" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:52352 IMAGE:3619576" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1965 /gene="KCNN3" /gene_synonym="hSK3" /gene_synonym="KCa2.3" /gene_synonym="SK3" /gene_synonym="SKCA3" /db_xref="GeneID:3782" /db_xref="HGNC:HGNC:6292" /db_xref="MIM:602983" CDS 132..1412 /gene="KCNN3" /gene_synonym="hSK3" /gene_synonym="KCa2.3" /gene_synonym="SK3" /gene_synonym="SKCA3" /codon_start=1 /product="potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3" /protein_id="AAH42147.1" /db_xref="GeneID:3782" /db_xref="HGNC:HGNC:6292" /db_xref="MIM:602983" /translation="MERPIKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDN GADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIIL SIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLV FSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGV CLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWL IYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMY DLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARG VSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSSC" BASE COUNT 486 a 552 c 497 g 430 t ORIGIN 1 caggaaagtc agcttgaagg acactccttg cagggactga gctggcacct actccttaga 61 gcttgctgat accaggcctg ccacgcgaca tctgcaagga cagttgtttg gtgttttgct 121 tcaggttata gatggagaga cctataaagg actccatgtt ttcgttggcc ctgaaatgcc 181 ttatcagtct gtccaccatc atccttttgg gcttgatcat cgcctaccac acacgtgaag 241 tccagctctt cgtgatcgac aatggcgcgg atgactggcg gatagccatg acctacgagc 301 gcatcctgta catcagcctg gagatgctgg tgtgcgccat ccaccccatt cctggcgagt 361 acaagttctt ctggacggca cgcctggcct tctcctacac accctcccgg gcggaggccg 421 atgtggacat catcctgtct atccccatgt tcctgcgcct gtacctgatc gcccgagtca 481 tgctgctgca cagcaagctc ttcaccgatg cctcgtcccg cagcatcggg gccctcaaca 541 agatcaactt caacacccgc tttgtcatga agacgctcat gaccatctgc cctggcactg 601 tgctgctcgt gttcagcatc tctctgtgga tcattgctgc ctggaccgtc cgtgtctgtg 661 aaaggtacca tgaccagcag gacgtaacta gtaactttct gggtgccatg tggctcatct 721 ccatcacatt cctttccatt ggttatgggg acatggtgcc ccacacatac tgtgggaaag 781 gtgtctgtct cctcactggc atcatgggtg caggctgcac tgcccttgtg gtggccgtgg 841 tggcccgaaa gctggaactc accaaagcgg agaagcacgt tcataacttc atgatggaca 901 ctcagctcac caagcggatc aagaatgctg cagccaatgt ccttcgggaa acatggttaa 961 tctataaaca cacaaagctg ctaaagaaga ttgaccatgc caaagtgagg aaacaccaga 1021 ggaagttcct ccaagctatc caccagttga ggagcgtcaa gatggaacag aggaagctga 1081 gtgaccaagc caacactctg gtggaccttt ccaagatgca gaatgtcatg tatgacttaa 1141 tcacagaact caatgaccgg agcgaagacc tggagaagca gattggcagc ctggagtcga 1201 agctggagca tctcaccgcc agcttcaact ccctgccgct gctcatcgcc gacaccctgc 1261 gccagcagca gcagcagctc ctgtctgcca tcatcgaggc ccggggtgtc agcgtggcag 1321 tgggcaccac ccacacccca atctccgata gccccattgg ggtcagctcc acctccttcc 1381 cgaccccgta cacaagttca agcagttgct aaataaatct ccccactcca gaagcattac 1441 ccataggtct taagatgcaa atcaactctc tcctggtcgc tttgccatca agaaacattc 1501 agaccaggga acggaaagaa gagagaccga gctaattaac taactcatgt tcattcagcg 1561 tgcttggtcc gacatgcctt gaaaccagaa atctaatctc tgtttaggtg cctctacttg 1621 ggagcgggaa gaggagatga caggaagcga cgcctctggc agggcccttg ctgcagagtt 1681 ggtggagaac agaaatccac gctcaatctc aggtcttcac gcggggggtg ggggtcagat 1741 gcactgaagt agccaacagc gaagccagtc cagaagaggg gtccgctggg agggagggtt 1801 gtgtcaggct tgggggatgg gctcttcgcc atgggggtct ttgaacacac ctctctcctt 1861 tccttttgtc tacggaagcc tctgggtgac aaaagtaaaa gagagctgcc cacaacttgc 1921 caaaacagat atactcgaat cagactgaaa aaaaaaaaaa aaaaa //