LOCUS BC041829 1132 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens chromosome 17 open reading frame 39, mRNA (cDNA clone MGC:43491 IMAGE:5268071), complete cds. ACCESSION BC041829 VERSION BC041829.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1132) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1132) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 74 Row: e Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47078274. FEATURES Location/Qualifiers source 1..1132 /db_xref="H-InvDB:HIT000052624" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43491 IMAGE:5268071" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1132 /gene="C17orf39" /gene_synonym="MGC3048" /db_xref="GeneID:79018" /db_xref="HGNC:HGNC:28453" CDS 174..1076 /gene="C17orf39" /gene_synonym="MGC3048" /codon_start=1 /product="chromosome 17 open reading frame 39" /protein_id="AAH41829.1" /db_xref="GeneID:79018" /db_xref="HGNC:HGNC:28453" /translation="MCARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSR PHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAA SLIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLK IKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSD DFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHR SSEWYQSLNLTHVPEHSAPIYEFR" BASE COUNT 234 a 351 c 314 g 233 t ORIGIN 1 agcgtgccgc tcgcgcaccg cgccacgtgt tttctcctcc cgccaatggg cggaagcgcc 61 gcctgagcct gctcccgccc cccaggctcg cctgagccaa tcggaagggg cggggtgtgt 121 gtgtgtctgt gtgtgtttgt gtgttgtgtg tctgtgagtg tctgtgtgtg tgtatgtgtg 181 cgcgagggca agtcgggagg gggacccagc tcaggactgg gaggccctgc tcgcaggtcc 241 ctgggtcccg gtggcggccg gagcgcttgc tccgcaggca gcgggcgggt ggtcgcccct 301 cccgccccca ccccgcgcgt gcgcgccccg gcctctccct ccccgccacc ctcctcggct 361 cccgcgcggc ggcggcggtt cctctcccac tccccccagc cctggctccg ggggaccccg 421 cgatgccggt ccgcaccgag tgtcccccgc cggccggtgc ctccgctgcc tccgcggcct 481 cactcatccc gccgccgccc atcaacaccc agcagcccgg cgtggccacc agcctgctct 541 acagcggctc caagttccgc ggccaccaga agagcaaggg gaactcgtac gacgtagagg 601 tggtgctgca gcacgtggac acgggaaact cttacctttg tgggtacttg aagattaaag 661 gccttactga ggagtatcca acccttacaa ccttcttcga aggagaaata atcagcaaaa 721 aacacccttt cttaactcgc aagtgggatg cagatgaaga tgttgatcgg aaacactggg 781 gcaagtttct ggctttttat cagtatgcaa aatcatttaa ctcagatgac tttgattatg 841 aagagctgaa gaatggagac tacgtcttca tgaggtggaa ggaacagttt ctggtcccag 901 atcacacgat caaagacatc agtggtgctt cttttgccgg gttctactac atctgctttc 961 agaagtcagc agcctccata gagggctact actaccatag gagttcagaa tggtatcagt 1021 ccctcaatct aacccatgtt cctgaacaca gtgcacccat ctatgaattc cggtgacaac 1081 ggttcagaac agcaaccaaa taaaactgaa cttggcaaaa aaaaaaaaaa aa //