LOCUS BC041829 1132 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 39, mRNA (cDNA clone
MGC:43491 IMAGE:5268071), complete cds.
ACCESSION BC041829
VERSION BC041829.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1132)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1132)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: e Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078274.
FEATURES Location/Qualifiers
source 1..1132
/db_xref="H-InvDB:HIT000052624"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43491 IMAGE:5268071"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1132
/gene="C17orf39"
/gene_synonym="MGC3048"
/db_xref="GeneID:79018"
/db_xref="HGNC:HGNC:28453"
CDS 174..1076
/gene="C17orf39"
/gene_synonym="MGC3048"
/codon_start=1
/product="chromosome 17 open reading frame 39"
/protein_id="AAH41829.1"
/db_xref="GeneID:79018"
/db_xref="HGNC:HGNC:28453"
/translation="MCARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSR
PHPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAA
SLIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLK
IKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSD
DFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHR
SSEWYQSLNLTHVPEHSAPIYEFR"
BASE COUNT 234 a 351 c 314 g 233 t
ORIGIN
1 agcgtgccgc tcgcgcaccg cgccacgtgt tttctcctcc cgccaatggg cggaagcgcc
61 gcctgagcct gctcccgccc cccaggctcg cctgagccaa tcggaagggg cggggtgtgt
121 gtgtgtctgt gtgtgtttgt gtgttgtgtg tctgtgagtg tctgtgtgtg tgtatgtgtg
181 cgcgagggca agtcgggagg gggacccagc tcaggactgg gaggccctgc tcgcaggtcc
241 ctgggtcccg gtggcggccg gagcgcttgc tccgcaggca gcgggcgggt ggtcgcccct
301 cccgccccca ccccgcgcgt gcgcgccccg gcctctccct ccccgccacc ctcctcggct
361 cccgcgcggc ggcggcggtt cctctcccac tccccccagc cctggctccg ggggaccccg
421 cgatgccggt ccgcaccgag tgtcccccgc cggccggtgc ctccgctgcc tccgcggcct
481 cactcatccc gccgccgccc atcaacaccc agcagcccgg cgtggccacc agcctgctct
541 acagcggctc caagttccgc ggccaccaga agagcaaggg gaactcgtac gacgtagagg
601 tggtgctgca gcacgtggac acgggaaact cttacctttg tgggtacttg aagattaaag
661 gccttactga ggagtatcca acccttacaa ccttcttcga aggagaaata atcagcaaaa
721 aacacccttt cttaactcgc aagtgggatg cagatgaaga tgttgatcgg aaacactggg
781 gcaagtttct ggctttttat cagtatgcaa aatcatttaa ctcagatgac tttgattatg
841 aagagctgaa gaatggagac tacgtcttca tgaggtggaa ggaacagttt ctggtcccag
901 atcacacgat caaagacatc agtggtgctt cttttgccgg gttctactac atctgctttc
961 agaagtcagc agcctccata gagggctact actaccatag gagttcagaa tggtatcagt
1021 ccctcaatct aacccatgtt cctgaacaca gtgcacccat ctatgaattc cggtgacaac
1081 ggttcagaac agcaaccaaa taaaactgaa cttggcaaaa aaaaaaaaaa aa
//