LOCUS BC041814 4146 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens cryptochrome 2 (photolyase-like), mRNA (cDNA clone MGC:43402 IMAGE:5266781), complete cds. ACCESSION BC041814 VERSION BC041814.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4146) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4146) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 74 Row: a Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29789121. FEATURES Location/Qualifiers source 1..4146 /db_xref="H-InvDB:HIT000052623" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43402 IMAGE:5266781" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4146 /gene="CRY2" /gene_synonym="HCRY2" /gene_synonym="KIAA0658" /gene_synonym="PHLL2" /db_xref="GeneID:1408" /db_xref="HGNC:HGNC:2385" /db_xref="MIM:603732" CDS 14..1795 /gene="CRY2" /gene_synonym="HCRY2" /gene_synonym="KIAA0658" /gene_synonym="PHLL2" /codon_start=1 /product="cryptochrome 2 (photolyase-like)" /protein_id="AAH41814.1" /db_xref="GeneID:1408" /db_xref="HGNC:HGNC:2385" /db_xref="MIM:603732" /translation="MAATVATAAAVAPAPAPGTDSASSVHWFRKGLRLHDNPALLAAV RGARCVRCVYILDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADV FPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIEL NGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELG FPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRF GCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPIC IQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVS WESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRR YLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ QLSRYRGLCLLASVPSCVEDLSHPVAEPSSSQAGSMSSAGPRPLPSGPASPKRKLEAA EEPPGEELSKRARVAELPTPELPSKDA" BASE COUNT 895 a 1177 c 1169 g 905 t ORIGIN 1 agtctggaca gtcatggcgg cgactgtggc gacggcggca gctgtggccc cggcgccagc 61 gcccggcacg gacagcgcct cttcggtgca ctggttccgc aaagggctgc gactccacga 121 caacccggcg ttgctggcgg ccgtgcgcgg ggcgcgctgc gtgcgctgcg tttacattct 181 cgacccgtgg ttcgcggcct cctcctcagt cgggatcaac cgatggaggt tcctacttca 241 gtctctggaa gatttggaca caagtttaag gaaactgaac tcccgcctgt ttgtagtccg 301 gggacagcca gccgacgtgt tcccaaggct gttcaaggaa tggggagtga cccgcttgac 361 ctttgaatat gactctgaac cctttgggaa agaacgggat gcagccatca tgaagatggc 421 caaggaggct ggtgtggaag tagtgacgga gaattctcat accctctatg acctggacag 481 gatcattgag ctgaatgggc agaagccacc ccttacatac aagcgctttc aggccatcat 541 cagccgcatg gagctgccca agaagccagt gggcttggtg accagccagc agatggagag 601 ctgcagggcc gagatccagg agaaccacga cgagacctac ggcgtgccct ccctggagga 661 gctggggttc cccactgaag gacttggtcc agctgtctgg cagggaggag agacagaagc 721 tctggcccgc ctggataagc acttggaacg gaaggcctgg gttgccaact atgagagacc 781 ccgaatgaac gccaactccc tcctggccag ccccacaggc ctcagcccct acctgcgctt 841 tggttgtctc tcctgccgcc tcttctacta ccgcctgtgg gacctgtata aaaaggtgaa 901 gcggaacagc acacctcccc tctccctatt tgggcaactc ctatggcgag agttcttcta 961 cacggcagct accaacaacc ccaggtttga ccgcatggag gggaacccca tctgcatcca 1021 gatcccctgg gaccgcaatc ctgaggccct ggccaagtgg gctgagggca agacaggctt 1081 cccttggatt gatgccatca tgacccaact gaggcaggag ggctggatcc accacctggc 1141 ccggcatgcc gtggcctgct tcctgacccg cggggacctc tgggtcagct gggagagcgg 1201 ggtccgggta tttgatgagc tgctcctgga tgcagatttc agcgtgaacg caggcagctg 1261 gatgtggctg tcctgcagtg ctttcttcca gcagttcttc cactgctact gccctgtggg 1321 ctttggccgt cgcacggacc ccagtgggga ctacatcagg cgatacctgc ccaaattgaa 1381 agcgttcccc tctcgataca tctatgagcc ctggaatgcc ccagagtcaa ttcagaaggc 1441 agccaagtgc atcattggtg tggactaccc acggcccatc gtcaaccatg ccgagaccag 1501 ccggcttaac attgaacgaa tgaagcagat ttaccagcag ctttcgcgct accggggact 1561 ctgtctactg gcatctgtcc cttcctgtgt ggaagacctc agtcaccctg tggcagagcc 1621 cagctcgagc caggctggca gcatgagcag tgcaggccca agaccactac ccagtggccc 1681 agcatccccc aaacgcaagc tggaagcagc cgaggaacca cctggtgaag aactcagcaa 1741 acgggcccgg gtggcagagt tgccaacccc agagctgccg agcaaggatg cctgagactg 1801 cagagccctt gctccgtgag caaagcctgg gtgcccaagc agccaccgca gcagcagagt 1861 acaacctgca gagaagctga tcaccgggca gagatagagc gagcatgtgt gtgtgtgtgc 1921 gcgtgtgcag aggagggagt ggtgtgcctg tttgtgtgtg catgcatctg ttgacactca 1981 tgattctgaa tgttgcctgg gctgggggag tacctgtagc acgccagtgc tgtttcccgg 2041 cctccagaca caaggctcga ggttatggca gtgactttca gctgagacct gttcctgcaa 2101 gccagctgcc ttgtctgaac agaacgtagt ggtaggaccc tagctgggat tctggcatct 2161 gcctccctag acctccttcc ctccctcctc acgtcaggct gtggagcagg agcacagcag 2221 ttctggctgt tgtccaaagc atgggattct ggaggcagcc agagccctgc tgagttcctg 2281 ctttctgacc tggaggctga gcaggccgga gtggatggat gctgtccaga cgtagccacc 2341 tggcctctgt ttcttatttt aaaattctct gctactgggc tcagtcccag gcccttcctt 2401 gggcttctgg gactgagcat gaggccatag acagatctaa aaagtttcca ccaccctaca 2461 gaagtacaca cagatacctg actggtgtgg ggtatgcctg gtactgtaat aggagcctaa 2521 gacagcacac ctaccttttc aggatttaga acctaaaatt agaaagagaa tcccagctgt 2581 cattgttcct tccccagaag ctaagagcca gcctcagagc ctacccagga gctgtgaagg 2641 ggcaagggtc aaactgactc actctaccag gaggagacca ggttgcagtg gcgtaaggcc 2701 ccctggtttc tctggccaca ctccaaggca ccacagtgct gccagtgagg acagctgaca 2761 cccagccagg gaaaccattc tagtctttat tctgttggct tccagggcct gtcctggact 2821 tgtcagcatc cagactgcca tgtcagctat cccagtagct gagctccaag gactcaggca 2881 gagggactca gggatgggga ctgccagggg cagttggcaa aagtccaagt agagattaca 2941 cccagcacac cattccttcc aggagcagta ggtgggaggt ttgacccaga gaagccaatc 3001 cttgcattcc aggagtggcc tgtgcctccc acctcttcct tcccactgcc aaaggcctgt 3061 gttgagaaag atgtcatgca aaaggacgac ggtggccaac taaagcaagt cttccttcca 3121 ccctgtggcc tgcacttgag ccacaaagtg tgtgtgtgtg tgtgcgtgtg tggtacgtgt 3181 gtgtgtgtgt ggctatgagg ctgattcctg tttggatttt tgtcctcacg tgtatcatta 3241 agctggcctt tgggcctttt cctttctacc tcccctgtga cctttcctag cctcagatct 3301 gttaattctt ttggccccag ccctgtccct cactgtcctc tgtccttgga ccagaaccct 3361 ggggtcagac ccatctcctg tagctgtcca tcacactgac aggcttcttc ctgagatatc 3421 ctcaggtttt ctcagccaga gagctgcctt tagagtccaa ctgttgtacg tatgtcacct 3481 tcactagaaa tgtcccatca tcgtgggagg ggagcagggc acaggggatg gtgtgcattc 3541 agagcattgg gttgggggct tccctgttcc ctcagcccca gtcgagagga aagagaatcg 3601 ggccactgcc agaaagagag tcaagcaaac ctggaagggc aaatctgaga gtgggaaggc 3661 caaaggccga ggcccagatt tagtattcac tagcagcgcc ttcgggtagc aggatgattc 3721 cttttcctgc ctgtctgctg ctggctctct tccctaaggt acaggttggc aggaccacct 3781 ccgcctactt ctccaccatc cctagcatgc cagcccgttc ccagatcaac ctgccagtgg 3841 agtcaggcag tgcactcctg gagccaagag ggaagggcag ggtagagagg gtatgtccag 3901 tagcctggag ctccatggtg gcttcatgcc tcccttctcc cagctcaggt ggccctgagg 3961 gctccctcgg aacagtgcct caaatcctga cccaagggcc agcatgggga agagatggtt 4021 gcaggcaaaa tgcactttat agagattttc tattgctggg aaggtgtgtt tctcccacaa 4081 tttgtttgtg aatattcact tgttttataa atgtctgacc tgtcttgagg aaaaaaaaaa 4141 aaaaaa //