LOCUS BC041792 4213 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens AT rich interactive domain 3B (BRIGHT-like), mRNA (cDNA clone MGC:33888 IMAGE:5297774), complete cds. ACCESSION BC041792 VERSION BC041792.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4213) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4213) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: m Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..4213 /db_xref="H-InvDB:HIT000052611" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33888 IMAGE:5297774" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4213 /gene="ARID3B" /gene_synonym="BDP" /gene_synonym="DRIL2" /db_xref="GeneID:10620" /db_xref="HGNC:HGNC:14350" CDS 157..1845 /gene="ARID3B" /gene_synonym="BDP" /gene_synonym="DRIL2" /codon_start=1 /product="AT rich interactive domain 3B (BRIGHT-like)" /protein_id="AAH41792.1" /db_xref="GeneID:10620" /db_xref="HGNC:HGNC:14350" /translation="MEPLQQQQQQQQQQQQKQPHLAPLQMDAREKQGQQMREAQFLYA QKLVTQPTLLSATAGRPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDE DGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHGQQAKEDHTK DASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLYELDGDPE RKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREIT KGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSS SLFGYSPAAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGDG APVTTVPVPNRLAVPVTLASQQAGTRTAALEQLRERLESGEPAEKKASRLSEEEQRLV QQAFQRNFFSMARQLPMKIRINGRAEDRAEASAAALNLTTSSIGSINMSVDIDGTTYA GVLFAQKPVVHLITGSAPQSLGSSASSSSSSHCSPSPTSSRGTPSAEPSTSWSL" BASE COUNT 942 a 1268 c 1131 g 872 t ORIGIN 1 agtccgagac gcagctgccg cgccggggcc tgagctgccg cctcctccgc cgcccgaaaa 61 cccggagtgc cccgcacagg tttagaccca gtgtgcctgg tgggctgtgc ccaggttcag 121 agtcatgcca ctctgtgggt gaagcttgag gcaaaaatgg agccacttca gcagcagcag 181 cagcagcagc agcagcaaca acagaagcag ccacacctgg ctcctctgca gatggatgcc 241 agagagaagc agggccagca gatgagagaa gcccagttct tgtatgccca aaagctggtc 301 acacagccga ctctcctttc cgccacagct gggagacctt ctggcagcac tcccttaggt 361 cccttagcca gagttccacc caccgcagca gtggcccaag tgtttgaacg gggcaacatg 421 aactcagagc ctgaggaaga ggacggaggt ttggaagatg aggatgggga tgatgaagtt 481 gcagaggtgg ctgagaaaga aacccaggct gcttcaaaat attttcatgt gcagaaagta 541 gctcgccaag atcccagagt ggcacccatg tccaatctac ttccagcacc agggctccca 601 ccacatggac aacaagctaa agaagaccat accaaagatg cttccaaggc ctcaccttct 661 gtctccacag caggacagcc gaactggaat ctggatgagc agctcaagca gaatggtggt 721 ttggcctgga gtgatgatgc agatggaggc cggggaagag agatctctcg agattttgcc 781 aagctgtatg aactggacgg tgatcctgaa aggaaagagt tcctggatga cctcttcgtc 841 tttatgcaga agagggggac ccccatcaac cgaatcccca tcatggccaa acagatcctg 901 gacctgtaca tgctgtataa gctggtgacc gagaagggag gcctggtgga gatcatcaac 961 aagaagatct ggagggagat caccaaaggc ctaaacctgc ccacatccat caccagcgcc 1021 gccttcaccc tcaggacgca gtacatgaag tatctgtatg cctatgagtg tgagaagaaa 1081 gccttgagtt ccccagccga gctccaggca gcaattgatg gcaaccgcag ggagggccgg 1141 cggcccagct acagctcctc cctctttggc tactcacctg ctgcggctac tgctgctgcc 1201 gctgccgggg cccctgccct tctctcccca cccaagatcc gctttcccat ccttgggctt 1261 ggctccagca gtggtaccaa taccagtagc cctcggatat ccccagcaac cactctcagg 1321 aaaggtgatg gagccccagt gacaacagtg cctgtgccaa atcgtctggc tgtgcccgtg 1381 accttggcaa gccagcaggc tggtactcgg accgccgcac tggagcagct gcgggagcgg 1441 ctggagtcag gggagcctgc tgagaagaag gcatcgaggc tgtctgagga ggagcagcgc 1501 ctggtgcagc aggccttcca gcgcaacttt ttcagcatgg cacggcagct ccccatgaag 1561 atcaggatca acggcagggc agaagacaga gcagaggcct cggctgcagc actgaacctg 1621 accacgagta gcattgggag cattaacatg tctgtggaca tcgatggcac cacctatgca 1681 ggtgtgctgt ttgcccagaa gcctgtggtc cacctcatca cggggtctgc tccccagagc 1741 ctcggcagca gcgccagcag cagcagcagc tctcactgtt caccaagtcc tacctcatcc 1801 cggggcaccc ccagcgcaga gccctccacc agctggtccc tctgatgggc aggacccagc 1861 ttcccacttg ccactctcct gtcgagagtg aaggaagttg atgcacagaa tttacctcat 1921 ctcacagagc ccacgtcgac gagcaccatt tggccagaca ttgagagttt ggacgtgtcc 1981 gtctgtccag gctccattca ggtcctgctg tactctgggg gcagggagag gctagagggg 2041 caggacagac agcgttgtcc aatcagggat tgtcctggag aactgggtgg gggtctgtgg 2101 gtgtccagct tcctccaggg ttccccagcc acctcccagc tcagggcaca gtgtatcgac 2161 aatctgtcag ccgacgcagg gctggaggcc ctccatttcc ctcccctttt aatttatttc 2221 cctgaccctg ccttctgcca tgaccccagg gccactagtc tcttcccctg tttttaagtc 2281 ccatgtgggg ctgccaggag ccaagagcat gccttcatgc ccttctctgc agagcatggg 2341 atggggccct tccagcccac tttgcctact gttaggttcc tggggtacgg gtccctcaaa 2401 cacaagtctt gaatcagtcc tcagggcccc agatccccct tctaatagtc tgaaggaaga 2461 ggctgtgagg gcagttcagg gccagggccc acagggcatc tgctgatggg aaggcagagc 2521 ctcggggctg cccagccctg gcacctgctt cacacggacc attctctgac cgcccccgcc 2581 aaacctcatg ctccccactt gcccttattg gcctgctttc ccaaaaacag cccactcatc 2641 ctttccccag ccctcttcag ccctccccag tcctccccag ccttcttcag ccttcttcag 2701 ctcagccctc ttctatttct tatggggcca tcttggcctc accatcccca cacgtgccga 2761 tgtcaggttc attgaaatac ctcagatttg taattgttga tgtttgagtc ttcaggaagt 2821 atttgcatct ctgaaatctt ttttatatgt gttttgctga cttttgtttt ttttttattt 2881 taaaattttt atcgtagcac caaagaaatg aaaacagatc acccccaaag ccaagcaagt 2941 gattgggtaa cccggcccct ctggcccttc cctcaagccc agtgaggagg tgggtggagg 3001 catgcagggg agacgactca gggatcgcgg gggcggggag gtggagtgga gaggcccgct 3061 ctcacaccgg gtcgggccct gaaactgtac cagttctgaa gaccgttttc tgccacaccc 3121 ccacccccag ctgaccaggg aggcagagga cacctcccca tcactcagca ttcccagctc 3181 agggcacagg caggctgggg tcctcgctgg ccttgccaga ggttgagccg ccccagggta 3241 tgaggagacg aataactcca cagctcctcc tggaccctgc gcgggagcag gcagctcctg 3301 tgctgtaaag aaaattgatt cgcttgcggc tcacctcagt cgaggaagcc ctggaatgtt 3361 cagcagaaca ccaccactgt gacatggggc tgtggcagtg ggagacaccg cgcgtggcgt 3421 gggtgtgtgt ggcagcgtgg ctcgcattca gtcctgtgta ggagaggaaa gggaatcaaa 3481 agcttgagca caaacagata cctcagcccg gtaagctgca gctctgctca actgcgtctt 3541 ctctcagccc tccacacaca ctcaccccca ctcccacaca catacacaca cacacacaca 3601 taccccatct cccgagggct gacctcctct ggcctcagcc tgcagggtgt gggcagagaa 3661 gggcatctgg gacgtggtgc cagtgaggag cccagttggc tggcactggg cccatttgaa 3721 ggtgtctcag acatttggcc agtatgtctt tctcaggggt ttggtcacaa aggatggact 3781 cttcccaccc agaggatgca gggaaagcac actgtgtctt tccggtcatt ggatcctctc 3841 cctttcccca ggcagctcgc ctggccacac cgttggagtg aaccctcact gccctcaagg 3901 acaacagcag ggtgtcaccc agagcccgat gaggggtgcc agcaggtgcc cccacgagtg 3961 gggccttggc ccaagcagag cttcccctga aggtgccatc agccagggca gctctgtccc 4021 ctcctgctct ccatcttata tgtattctaa ccaggaaaaa tgtgatagca catgggtagc 4081 ctaggcagtg agtaaatacc tcagatgtcc tcctgcagca agtgtctata tgttgtggtt 4141 attttctatc ttacatgttc tcgaatgttt atatttcaat aaacctctac ctcttcgaaa 4201 aaaaaaaaaa aaa //