LOCUS BC041700 5388 bp mRNA linear HUM 06-JUL-2004 DEFINITION Homo sapiens rabaptin, RAB GTPase binding effector protein 1, mRNA (cDNA clone MGC:48839 IMAGE:6046320), complete cds. ACCESSION BC041700 VERSION BC041700.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5388) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5388) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: o Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759005. FEATURES Location/Qualifiers source 1..5388 /db_xref="H-InvDB:HIT000052596" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48839 IMAGE:6046320" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..5388 /gene="RABEP1" /gene_synonym="RAB5EP" /gene_synonym="RABPT5" /db_xref="GeneID:9135" /db_xref="MIM:603616" CDS 191..2779 /gene="RABEP1" /gene_synonym="RAB5EP" /gene_synonym="RABPT5" /codon_start=1 /product="RABEP1 protein" /protein_id="AAH41700.1" /db_xref="GeneID:9135" /db_xref="MIM:603616" /translation="MAQPGPASQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRA KFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEA IDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRR LSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVK ELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQL KHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEDDEQQRLNKRKD HKKADVEEEIKIPVVCALTQEESSAQLSNEEEHLDSTRGSVHSLDAGLLLPSGDPFSK SDNDMFKDGLRRAQSTDSLGTSGSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSE NFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYR LVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQLMLRQ ANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDV QEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTTEALRELVL KYREDIINVRTAADHVEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIAS ISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKISLEEQLKKETAAKATVEQLMF EEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDI NQLPET" BASE COUNT 1722 a 1019 c 1264 g 1383 t ORIGIN 1 ggcggaggtc ggcggtcggg tccgtctctg cccgcggctg tggcggcgcc ggcggatcca 61 gccttagcgg ttcctctctg ggcggcggcg gcggcggctc ggttgacgcc tcctccgcca 121 gctgagcccg cgggagccca ggacgccgct tccccgccca tccccgctcc ccgaggccgg 181 ccgcctggtc atggcgcagc cgggcccggc ttcccagcct gacgtttctc ttcagcaacg 241 ggtagcagaa ttggaaaaaa ttaatgcaga atttttacgt gcacaacagc agcttgaaca 301 agaatttaat caaaagagag caaaatttaa ggagttatat ttggctaaag aggaggatct 361 gaagaggcaa aatgcagtat tacaagctgc acaagatgat ttgggacacc ttcgaaccca 421 gctgtgggaa gctcaagcag agatggagaa tattaaggcg attgccacag tctctgagaa 481 caccaagcaa gaagctatag atgaagtgaa aagacagtgg agagaagaag ttgcttcact 541 tcaggctgtt atgaaagaaa cagttcgtga ctatgagcac cagttccacc ttaggctgga 601 gcaggagcga acacagtggg cacagtatag agaatccgca gagagggaaa tagctgattt 661 aagaagaagg ctgtctgaag gtcaagagga ggaaaattta gaaaatgaaa tgaaaaaggc 721 ccaagaggat gctgagaaac ttcggtccgt tgtgatgcca atggaaaagg aaattgcagc 781 tttgaaggat aaactgacag aggctgaaga caaaattaaa gagctggagg cctcaaaggt 841 taaagaactg aatcattatc tggaagctga gaaatcttgt aggactgatc tagagatgta 901 tgtagctgtt ttgaatactc agaaatctgt tctacaggaa gatgctgaga aactgcggaa 961 agaattgcat gaagtttgcc atctcttgga gcaagagcga caacaacaca accagttaaa 1021 acatacgtgg cagaaggcca atgaccagtt tctggaatct cagcgtttac tgatgagaga 1081 catgcagcga atggagattg tgctaacttc agaacagctc cgacaagttg aagaactgaa 1141 gaagaaagat caggaggatg atgaacaaca aagactcaat aagagaaagg atcacaaaaa 1201 agcagatgtt gaggaagaaa taaaaatacc agtagtgtgt gctttaactc aagaagaatc 1261 ttcagcccag ttatcaaatg aagaggagca tttagacagc acccgtggct cagttcattc 1321 cttagatgca ggcttgctgt tgccatctgg agatcctttc agtaaatcgg acaatgacat 1381 gtttaaagat ggactcagga gagcacagtc tacagacagc ttgggaacct cgggctcatt 1441 gcaatccaaa gctttaggct ataactacaa agcaaaatct gctggaaacc tggacgagtc 1501 agattttgga ccactggtag gagcagattc agtgtctgag aactttgata ctgcatccct 1561 tgggtcactc cagatgccaa gtgggtttat gttaaccaaa gatcaggaaa gagcaatcaa 1621 ggcgatgaca ccagaacaag aagagacagc gtccctcctc tccagcgtta cccagggcat 1681 ggagagtgcc tatgtgtccc ctagtggtta tcgtttagtt agtgaaacag aatggaatct 1741 cttgcagaaa gaggtacata atgctggaaa taaacttggt agacgttgtg atatgtgttc 1801 caattacgaa aaacagttac aaggaattca gattcaggag gctgaaacga gagaccaggt 1861 gaaaaaacta cagctgatgc taaggcaagc taatgaccag ttagagaaga caatgaaaga 1921 taagcaggag ctggaagact tcataaagca aagcagcgaa gattcgagtc accagatctc 1981 tgcactcgtc ctaagagccc aggcctccga gatcttactt gaagagttac agcaggggct 2041 ttcccaggca aagagggatg ttcaggaaca gatggcggtg ctgatgcagt cacgggaaca 2101 ggtttcagaa gagctggtga ggttacagaa agataatgac agtctccagg gaaagcacag 2161 cctgcatgtg tcattacagc aagcagaaga cttcatcctc ccagacacta cagaggcact 2221 gcgggagttg gtattaaaat accgcgagga catcattaat gtgcggacag cagcagacca 2281 cgtagaagaa aagctgaagg ctgagatact tttcctaaaa gagcagatcc aagcagaaca 2341 gtgtttaaaa gaaaatcttg aagaaactct gcaactagaa atagaaaact gcaaggagga 2401 aatagcttct atttctagcc taaaagctga attagaaaga ataaaagtgg aaaaaggaca 2461 gttggagtcc acattaagag agaagtctca acagcttgag agtcttcagg aaataaagat 2521 cagtttggaa gagcagttaa agaaagagac tgctgctaag gctaccgttg aacagctaat 2581 gtttgaagag aagaacaaag ctcagagatt acagacagaa ttagatgtca gtgagcaagt 2641 ccagagagat tttgtaaagc tttcacagac ccttcaggtg cagttagagc ggatccggca 2701 agctgactcc ttggagagaa tccgggcaat tctgaatgat actaaactga cagacattaa 2761 ccagcttcct gagacatgac accctcatgg caggattcta gcctgcactt tgggttttta 2821 actcatcttt agagcaacag taattattat ttaactctta actgaagaaa gagaagtcac 2881 aacaaaagga agactggaga aatgcttact tctagaggga gaagactgtg cggcacagga 2941 aacagcaaac agcggggtga tctgcagccc agagaccttc aaatgcgaac actataaact 3001 ccaggcttga ttccaacagg cgtgggatca gatttggtga tggaaaaagc gctgtttcct 3061 tgcctgcttt ctccaagaca gattttcgga acacatttcc ctaccctaaa gcgacatccc 3121 agtagtgttt ggaattttct gttcatagat attggaagag agaatttgct ttatctgttg 3181 tctagagctc atcagtaaca gtattcagtt agcagacaga agtgtagtat gctgtatgaa 3241 tattttatat taaaatatga aggtttgaga gcaggccatt ggctactgac tgtatttccc 3301 ttgctcagta catttttgtt ttccttttac cattttatct tgctttggag gaccttaaat 3361 gctactgaaa cttacctgag aaccatagga ctgtggcaaa caaaaccaat tcatgaagtg 3421 aattaatgat gaggatctga aaacttggct ggggctatat atactggaag ttgaaggtta 3481 aaggaaaagc acaagaaact ttggaagcac tttttctgca tacttagatg atcttcatgg 3541 gcccacaggt accaggataa agccgaactg gtaccatcta ctcttttgaa gtgttttagt 3601 ctagttattg gatcagtgaa aaacattagt atacgttttt aaataggcta atttttcaac 3661 ttggatcatt aggcttacgt actacttgtt tcaaatgtgt caaatacaaa aatggtaact 3721 aggttgacag atactttgta tttttctttt gaattcagac ctggaatgta agtaagtgac 3781 aatgcttatg gaaagccagt tagttagaat tggaaatctg tcttgtcatt ttacaagcat 3841 tagattcctt tcctgtgtga agaaagcctc agtgaaacag gtctttgcca taactttatg 3901 aagtgctaca gaaagcacaa agaattgatt catgttcatc aatacctgct gagagtactg 3961 tcccaggaat atccagtgga tggattcatc atccaggagg ttcaaaagta agatggtttt 4021 caaatcattt ttgagactgg ttgcataaca gcagggtacc tgaaagagcc ttctgggagt 4081 tagtgaacta ggtagattgt tttgttcaca taacgccacc atcaacttaa agtgaattgt 4141 ctttgttata aatgaggtca ctatggactt accctaaaga tcttctgtac ttctgtcttc 4201 cataggacaa atgataagta ctacatacct catctcttgg gttattattg tagtcttgca 4261 ttcatgatta tgaatttaaa aataaatacc aattatggaa atagtactaa aggcttgccg 4321 cgcatgaaac attaattggt ttaaagtccc tttataaaga gtgctacatg gtttagataa 4381 aggaaacata taactattga gttacagggg attttattaa ttttaaaatg caatcaattt 4441 aaattatgta ggtttaagac tagtcccttg gataagcccc aagcgaattt gtcttcagat 4501 tattaaaatt agtgctgtaa atcagggtgg gcaattcaca gcctttctga actgactgaa 4561 ctagagcttg cagtgaagtg ttctgctgag actgagcacc ttacagatat ttttctccag 4621 aagatggtgc tgggtaataa aatcatcaca attagggaat ggttagtggt ctctactgtg 4681 gcaaatgcca actgttggaa ttcactttat tgtagaaaaa cccaaactga gactcttaag 4741 ttttgtttag caatgtgttt ctggtatgaa acaaactact gtgtcactgt ccaggtagga 4801 aacaattctt tcaactgggt tttcagcata aatgggaact gatgtagaag gcaggattta 4861 gcccttctag gcaaaagaaa agctcagttg ggtttcacga gtgttcctgt gcttatattc 4921 agtctgtgcc tacatgttct catgcatgtc taacctgatt tacctcttac ctgtaaccta 4981 ccttatcatg tggcttttaa ttggcagtca ctcgccattt ctaagcagat atagtactac 5041 ctttcagaac tcacattggc aagtgtaaaa agatgactta aggtgaagtg aggacaaaat 5101 cacattctgc atactaacct atttttttct ccctttaagg tgctaaactt gcacctcatg 5161 tccactcagt aacaagtatt gggacgtaga gcacagcctc actcagctct gaaaggtaat 5221 acagcctgtg aggaagtgag ccagcagtgg cctttgcaat tgtggatctt aagctctgct 5281 ctcagcagat ttcaggtgta accatttgtt aactgtactg aaggtgtgtc ctcaagaaga 5341 aagtgttcaa attaaaaaag ctgctgccaa gtaaaaaaaa aaaaaaaa //