LOCUS BC040948 2355 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens homeobox A11, mRNA (cDNA clone MGC:48802 IMAGE:5587615), complete cds. ACCESSION BC040948 VERSION BC040948.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2355) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2355) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: h Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24497552. FEATURES Location/Qualifiers source 1..2355 /db_xref="H-InvDB:HIT000052466" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48802 IMAGE:5587615" /tissue_type="Ovary, pooled from 3 adults" /clone_lib="NIH_MGC_125" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2355 /gene="HOXA11" /db_xref="GeneID:3207" /db_xref="HGNC:HGNC:5101" /db_xref="MIM:142958" CDS 73..1014 /gene="HOXA11" /codon_start=1 /product="homeobox A11" /protein_id="AAH40948.1" /db_xref="GeneID:3207" /db_xref="HGNC:HGNC:5101" /db_xref="MIM:142958" /translation="MDFDERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMT YSYSSNLPQVQPVREVTFREYAIEPATKWHPRGNLAHCYSAEELVHRDCLQAPSAAGV PGDVLAKSSANVYHHPTPAVSSNFYSTVGRNGVLPQAFDQFFETAYGTPENLASSDYP GDKSAEKGPPAATATSAAAAAAATGAPATSSSDSGGGGGCRETAAAAEEKERRRRPES SSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSR MLNLTDRQVKIWFQNRRMKEKKINRDRLQYYSANPLL" BASE COUNT 616 a 647 c 619 g 473 t ORIGIN 1 cttcaaagag gcagctgcag tggagaatca tgttaagctc ggctactgcg gagagcccaa 61 ggtagcccaa taatggattt tgatgagcgt ggtccctgct cctctaacat gtatttgcca 121 agttgtactt actacgtctc gggtccagat ttctccagcc tcccttcttt tctgccccag 181 accccgtctt cgcgcccaat gacatactcc tactcctcca acctgcccca ggtccaaccc 241 gtgcgcgaag tgaccttcag agagtacgcc attgagcccg ccactaaatg gcacccccgc 301 ggcaatctgg cccactgcta ctccgcggag gagctcgtgc acagagactg cctgcaggcg 361 cccagcgcgg ccggcgtgcc tggcgacgtg ctggccaaga gctcggccaa cgtctaccac 421 caccccaccc ccgcagtctc gtccaatttc tatagcaccg tgggcaggaa cggcgtcctg 481 ccacaggctt tcgaccagtt tttcgagaca gcctacggca ccccggaaaa cctcgcctcc 541 tccgactacc ccggggacaa gagcgccgag aaggggcccc cggcggccac ggcgacctcc 601 gcggcggcgg cggcggctgc aacgggcgcg ccggcaactt caagttcgga cagcggcggc 661 ggcggcggct gccgggagac ggcggcggca gcagaggaga aagagcggcg gcggcgcccc 721 gagagcagca gcagccccga gtcgtcttcc ggccacactg aggacaaggc cggcggctcc 781 agtggccaac gcacccgcaa aaagcgctgc ccctatacca agtaccagat ccgagagctg 841 gaacgggagt tcttcttcag cgtctacatt aacaaagaga agcgcctgca actgtcccgc 901 atgctcaacc tcactgatcg tcaagtcaaa atctggtttc agaacaggag aatgaaggaa 961 aaaaaaatta acagagaccg tttacagtac tactcagcaa atccactcct ctaagactcc 1021 agcggctgga attgggtggg gggcttcata cacatgagat aatatgcaga ttttgccctt 1081 gacaaagtca agccacatgg tgacttttga aaagaggtgt gcaagagagg gatgcatgga 1141 gatagcccca caggaggtgg tctgggactc tcttgattaa gatctcagtg gttaagattc 1201 ctaataatca ttggattctg agagctgtgc atcagctaga atgacaggtt tgggacccct 1261 ggtggttcac tcttggggcc tgcagagctg cgggctgggt gtggtctcca ctggggattg 1321 ggcccctgcc agaccccctg gagactaacc ccaccacacc ctccctctac tgggagccta 1381 cccaccccca ggacccctga gtaaaaaagc tgtgtgctct ccaagcccag ttcagcttgg 1441 ggacaggggc aggaggaagg ggtaggatta ctaggtgccc agaatgaggc tgctttccaa 1501 agccaatgtg aacagcggct ggacttggag gtagctttga ggtggaagag ggctgcaaat 1561 ccttgtggga aaagaaatct atgattccag gtggcatcag tgtctttcca ctcctcctag 1621 ccacccaccg cactgatcca gccctgagtt cctagccacc gcctcctaca gcccacctgg 1681 cttttctttc taccaaatga gggtcttggt tccagcctgc cactcaggcc caaagcctcg 1741 acacagagtg gactgttccc tgaggtggga gatgtggaaa agccaagagg ctgcagccag 1801 gccactggcc cctgagatct ctgcaggaaa tggctgtgga gtgtggcagt ttggcaaact 1861 ctccaccaca cgtaatgaaa cttggatttg ctcagtgtct ggctgcagag cagtgggcct 1921 ggccagcagg tccccagctt tggctatgag ggccttgagt cccccaaaac accgggttcc 1981 agcaccacac tcagccctca ttggctcttg aactgagctt ggaagcttct ggtgaccttc 2041 caagagcctg agagtgaggt ggaattattt taaaagataa atattatatt atatatatat 2101 atatttccct gaaggaacca aagcgaattt taaaagatgc aatgtagagg ggaaaagaga 2161 tgatgaaaat atttaaaggc cctatctgtt tacagtgttc cgtggttaaa ctcgctcact 2221 gctaagaata tttgaatgta tgcttcatac agggatggtg ttcaaaaaac ttgtaaataa 2281 aggaaccata atcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2341 aaaaaaaaaa aaaaa //