LOCUS BC040640 3045 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 19, mRNA (cDNA clone MGC:9689 IMAGE:3847806), complete cds. ACCESSION BC040640 VERSION BC040640.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3045) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3045) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: j Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40255148. FEATURES Location/Qualifiers source 1..3045 /db_xref="H-InvDB:HIT000052437" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9689 IMAGE:3847806" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3045 /gene="ARHGEF19" /gene_synonym="RP4-733M16.1" /gene_synonym="WGEF" /db_xref="GeneID:128272" /db_xref="HGNC:HGNC:26604" CDS 138..2546 /gene="ARHGEF19" /gene_synonym="RP4-733M16.1" /gene_synonym="WGEF" /codon_start=1 /product="Rho guanine nucleotide exchange factor (GEF) 19" /protein_id="AAH40640.1" /db_xref="GeneID:128272" /db_xref="HGNC:HGNC:26604" /translation="MDCGPPATLQPHLTGPPGTAHHPVAVCQQESLSFAELPALKPPS PVCLDLFPVAPEELRAPGSRWSLGTPAPLQGLLWPLSPGGSDTEITSGGMRPSRAGSW PHCPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRKMRVYQREEVPGCPEAHAVFL EPGQVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSASELMTRLHSSLRLGRNSAAR ALISGSGTGAAREGKASGMEARSVEMSGDRVSRPAPGDSREGDWSEPRLDTQEEPPLG SRSTNERRQSRFLLNSVLYQEYSDVASARELRRQQREEEGPGDEAEGAEEGPGPPRAN LSPSSSFRAQRSARGSTFSLWQDIPDVRGSGVLATLSLRDCKLQEAKFELITSEASYI HSLSVAVGHFLGSAELSECLGAQDKQWLFSKLPEVKSTSERFLQDLEQRLEADVLRFS VCDVVLDHCPAFRRVYLPYVTNQAYQERTYQRLLLENPRFPGILARLEESPVCQRLPL TSFLILPFQRITRLKMLVENILKRTAQGSEDEDMATKAFNALKELVQECNASVQSMKR TEELIHLSKKIHFEGKIFPLISQARWLVRHGELVELAPLPAAPPAKLKLSSKAVYLHL FNDCLLLSRRKELGKFAVFVHAKMAELQVRDLSLKLQGIPGHVFLLQLLHGQHMKHQF LLRARTESEKQRWISALCPSSPQEDKEVISEGEDCPQVQCVRTYKALHPDELTLEKTD ILSVRTWTSDGWLEGVRLADGEKGWVPQAYVEEISSLSARLRNLRENKRVTSATSKLG EAPV" BASE COUNT 584 a 944 c 955 g 562 t ORIGIN 1 ctgacatgct gacatcgccc cctgaggact tggctgcaac cccagagccc ccagggtgtc 61 ccggagccct ggaccgtgct ggcagctgga cggagctccc tggctgaggg ccaggtgggt 121 ggcagagcaa aagaggaatg gactgtgggc cacctgctac cctccagccc cacctgactg 181 ggccacctgg cactgcccac caccctgtag cagtgtgcca gcaggagagt ctgtcctttg 241 cagagctgcc cgccctgaag cccccgagcc cagtgtgtct ggaccttttc cctgttgccc 301 cagaggagct tcgggctcct ggcagccgct ggtccctggg gacccctgcc cctctccaag 361 ggttgctatg gccattatcc ccaggaggct cagatacaga gatcaccagc ggggggatgc 421 ggcccagcag ggctggcagc tggccacact gtcctggtgc ccagccccca gctctggagg 481 gaccctggag tccccgacac acacagccac agcgccgggc cagccacggc tcggagaaga 541 agtctgcctg gcgcaagatg cgggtgtacc agcgtgaaga ggtccccggc tgccccgagg 601 cccacgctgt cttcctagag cctggccagg tagtgcaaga gcaggccctg agcacagagg 661 agcccagggt ggagttgtct gggtccaccc gagtgagcct cgaaggtcct gagcggaggc 721 gcttctcggc atcggagctg atgacccggc tgcactcttc tctgcgcctg gggcggaatt 781 cagcagcccg ggcactcatc tctgggtcag gcaccggagc agcccgggaa gggaaagcat 841 ctggaatgga ggctcgaagt gtagagatga gcggggaccg ggtgtcgcgg ccagcccctg 901 gtgactcacg agagggcgat tggtccgagc ccaggctaga cacacaggaa gagccgcctt 961 tggggtccag gagcaccaac gagcggcgcc agtctcgatt cctccttaac tccgtcctct 1021 atcaggaata cagcgacgtg gccagcgccc gcgaactgcg gcggcagcag cgcgaggagg 1081 agggcccggg ggacgaggcc gagggcgcag aggaggggcc ggggccgccg cgggccaacc 1141 tctcccccag cagctccttc cgggcgcagc gctcggcgcg aggctccacc ttctcgctgt 1201 ggcaggatat ccccgacgta cgcggcagcg gcgtcctggc cacgctgagc ctgcgggact 1261 gcaagctgca ggaggccaag tttgagctga tcacctccga ggcctcctac atccacagcc 1321 tgtcggtggc tgtgggccac ttcttaggct ctgccgagct gagcgagtgt ctgggggcgc 1381 aggacaagca gtggctgttt tccaaactgc ccgaggtcaa gagcaccagc gagaggttcc 1441 tgcaggacct ggagcagcgg ctggaggcag atgtgctgcg cttcagcgtg tgcgacgtgg 1501 tgctggacca ctgcccggcc ttccgcagag tctacctgcc ctatgtcacc aaccaggcct 1561 accaggagcg cacctaccag cgcctgctcc tggagaaccc caggttccct ggcatcctgg 1621 ctcgcctgga ggagtctcct gtgtgccagc gtctgcccct tacctccttc cttatcctgc 1681 ccttccagag gatcacccgc ctcaagatgt tggtggagaa catcctgaag cggacagcac 1741 agggctctga agacgaagac atggccacca aggccttcaa tgcgctcaag gagctggtgc 1801 aggagtgcaa tgctagtgta cagtccatga agaggacaga ggaactcatc cacctgagca 1861 agaagatcca ctttgagggc aagattttcc cgctgatctc tcaggcccgc tggctggttc 1921 ggcatggaga gttggtagag ctggcaccac tgcctgcagc accccctgcc aagctgaagc 1981 tgtccagcaa ggcagtctac ctccacctct tcaatgactg cttgctgctc tctcggcgga 2041 aggagctagg gaagtttgcc gttttcgtcc atgccaagat ggctgagctg caggtgcggg 2101 acctgagcct gaagctgcag ggcatccccg gccacgtgtt cctcctccag ctcctccacg 2161 ggcagcacat gaagcaccag ttcctgctgc gggcccggac ggaaagtgag aagcagcgat 2221 ggatctcagc cttgtgcccc tccagccccc aggaggacaa ggaggtcatc agtgaggggg 2281 aagattgccc ccaggttcag tgtgttagga catacaaggc actgcaccca gatgagctga 2341 ccttggagaa gactgacatc ctgtcagtga ggacctggac cagtgacggc tggctggaag 2401 gggtccgcct ggcagatggt gagaaggggt gggtgcccca ggcctatgtg gaagagatca 2461 gcagcctcag cgcccgcctc cgaaacctcc gggagaataa gcgagtcaca agtgccacca 2521 gcaaactggg ggaggctcct gtgtgatggg cagccatggc ctaggacccc acctccatgc 2581 ctggctcctg gatggtcctg gaggggcctg cagtgtctcc attccccaag ctgctcctgc 2641 tggcacttcg cttctgtggc cttggcattg agggcacagg ctggacacag gaatgggggc 2701 gcctccagag ggtctctccg tcctcatgct cctcagtgtc cacacttcaa ggccaaggat 2761 agtttcttcc tctgacatgg ggaccataac aggtgatcac tgatacctgg caaagactgg 2821 ggccctctcc tttctatgtc ctcaatcctg cctgactctt ggtccttctg gcagggacct 2881 ggctggggaa cgttctggtg ctgatggtgc tgggacctat atgtatattt atatatatct 2941 ggggtcttgt ctaccacctc ccctggtcag agcctgagtg ggtgctggtt gctgtgtctt 3001 gtctgtaaat aaactcctat catgcctttt aaaaaaaaaa aaaaa //