LOCUS BC040640 3045 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 19, mRNA
(cDNA clone MGC:9689 IMAGE:3847806), complete cds.
ACCESSION BC040640
VERSION BC040640.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3045)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3045)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255148.
FEATURES Location/Qualifiers
source 1..3045
/db_xref="H-InvDB:HIT000052437"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9689 IMAGE:3847806"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3045
/gene="ARHGEF19"
/gene_synonym="RP4-733M16.1"
/gene_synonym="WGEF"
/db_xref="GeneID:128272"
/db_xref="HGNC:HGNC:26604"
CDS 138..2546
/gene="ARHGEF19"
/gene_synonym="RP4-733M16.1"
/gene_synonym="WGEF"
/codon_start=1
/product="Rho guanine nucleotide exchange factor (GEF) 19"
/protein_id="AAH40640.1"
/db_xref="GeneID:128272"
/db_xref="HGNC:HGNC:26604"
/translation="MDCGPPATLQPHLTGPPGTAHHPVAVCQQESLSFAELPALKPPS
PVCLDLFPVAPEELRAPGSRWSLGTPAPLQGLLWPLSPGGSDTEITSGGMRPSRAGSW
PHCPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRKMRVYQREEVPGCPEAHAVFL
EPGQVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSASELMTRLHSSLRLGRNSAAR
ALISGSGTGAAREGKASGMEARSVEMSGDRVSRPAPGDSREGDWSEPRLDTQEEPPLG
SRSTNERRQSRFLLNSVLYQEYSDVASARELRRQQREEEGPGDEAEGAEEGPGPPRAN
LSPSSSFRAQRSARGSTFSLWQDIPDVRGSGVLATLSLRDCKLQEAKFELITSEASYI
HSLSVAVGHFLGSAELSECLGAQDKQWLFSKLPEVKSTSERFLQDLEQRLEADVLRFS
VCDVVLDHCPAFRRVYLPYVTNQAYQERTYQRLLLENPRFPGILARLEESPVCQRLPL
TSFLILPFQRITRLKMLVENILKRTAQGSEDEDMATKAFNALKELVQECNASVQSMKR
TEELIHLSKKIHFEGKIFPLISQARWLVRHGELVELAPLPAAPPAKLKLSSKAVYLHL
FNDCLLLSRRKELGKFAVFVHAKMAELQVRDLSLKLQGIPGHVFLLQLLHGQHMKHQF
LLRARTESEKQRWISALCPSSPQEDKEVISEGEDCPQVQCVRTYKALHPDELTLEKTD
ILSVRTWTSDGWLEGVRLADGEKGWVPQAYVEEISSLSARLRNLRENKRVTSATSKLG
EAPV"
BASE COUNT 584 a 944 c 955 g 562 t
ORIGIN
1 ctgacatgct gacatcgccc cctgaggact tggctgcaac cccagagccc ccagggtgtc
61 ccggagccct ggaccgtgct ggcagctgga cggagctccc tggctgaggg ccaggtgggt
121 ggcagagcaa aagaggaatg gactgtgggc cacctgctac cctccagccc cacctgactg
181 ggccacctgg cactgcccac caccctgtag cagtgtgcca gcaggagagt ctgtcctttg
241 cagagctgcc cgccctgaag cccccgagcc cagtgtgtct ggaccttttc cctgttgccc
301 cagaggagct tcgggctcct ggcagccgct ggtccctggg gacccctgcc cctctccaag
361 ggttgctatg gccattatcc ccaggaggct cagatacaga gatcaccagc ggggggatgc
421 ggcccagcag ggctggcagc tggccacact gtcctggtgc ccagccccca gctctggagg
481 gaccctggag tccccgacac acacagccac agcgccgggc cagccacggc tcggagaaga
541 agtctgcctg gcgcaagatg cgggtgtacc agcgtgaaga ggtccccggc tgccccgagg
601 cccacgctgt cttcctagag cctggccagg tagtgcaaga gcaggccctg agcacagagg
661 agcccagggt ggagttgtct gggtccaccc gagtgagcct cgaaggtcct gagcggaggc
721 gcttctcggc atcggagctg atgacccggc tgcactcttc tctgcgcctg gggcggaatt
781 cagcagcccg ggcactcatc tctgggtcag gcaccggagc agcccgggaa gggaaagcat
841 ctggaatgga ggctcgaagt gtagagatga gcggggaccg ggtgtcgcgg ccagcccctg
901 gtgactcacg agagggcgat tggtccgagc ccaggctaga cacacaggaa gagccgcctt
961 tggggtccag gagcaccaac gagcggcgcc agtctcgatt cctccttaac tccgtcctct
1021 atcaggaata cagcgacgtg gccagcgccc gcgaactgcg gcggcagcag cgcgaggagg
1081 agggcccggg ggacgaggcc gagggcgcag aggaggggcc ggggccgccg cgggccaacc
1141 tctcccccag cagctccttc cgggcgcagc gctcggcgcg aggctccacc ttctcgctgt
1201 ggcaggatat ccccgacgta cgcggcagcg gcgtcctggc cacgctgagc ctgcgggact
1261 gcaagctgca ggaggccaag tttgagctga tcacctccga ggcctcctac atccacagcc
1321 tgtcggtggc tgtgggccac ttcttaggct ctgccgagct gagcgagtgt ctgggggcgc
1381 aggacaagca gtggctgttt tccaaactgc ccgaggtcaa gagcaccagc gagaggttcc
1441 tgcaggacct ggagcagcgg ctggaggcag atgtgctgcg cttcagcgtg tgcgacgtgg
1501 tgctggacca ctgcccggcc ttccgcagag tctacctgcc ctatgtcacc aaccaggcct
1561 accaggagcg cacctaccag cgcctgctcc tggagaaccc caggttccct ggcatcctgg
1621 ctcgcctgga ggagtctcct gtgtgccagc gtctgcccct tacctccttc cttatcctgc
1681 ccttccagag gatcacccgc ctcaagatgt tggtggagaa catcctgaag cggacagcac
1741 agggctctga agacgaagac atggccacca aggccttcaa tgcgctcaag gagctggtgc
1801 aggagtgcaa tgctagtgta cagtccatga agaggacaga ggaactcatc cacctgagca
1861 agaagatcca ctttgagggc aagattttcc cgctgatctc tcaggcccgc tggctggttc
1921 ggcatggaga gttggtagag ctggcaccac tgcctgcagc accccctgcc aagctgaagc
1981 tgtccagcaa ggcagtctac ctccacctct tcaatgactg cttgctgctc tctcggcgga
2041 aggagctagg gaagtttgcc gttttcgtcc atgccaagat ggctgagctg caggtgcggg
2101 acctgagcct gaagctgcag ggcatccccg gccacgtgtt cctcctccag ctcctccacg
2161 ggcagcacat gaagcaccag ttcctgctgc gggcccggac ggaaagtgag aagcagcgat
2221 ggatctcagc cttgtgcccc tccagccccc aggaggacaa ggaggtcatc agtgaggggg
2281 aagattgccc ccaggttcag tgtgttagga catacaaggc actgcaccca gatgagctga
2341 ccttggagaa gactgacatc ctgtcagtga ggacctggac cagtgacggc tggctggaag
2401 gggtccgcct ggcagatggt gagaaggggt gggtgcccca ggcctatgtg gaagagatca
2461 gcagcctcag cgcccgcctc cgaaacctcc gggagaataa gcgagtcaca agtgccacca
2521 gcaaactggg ggaggctcct gtgtgatggg cagccatggc ctaggacccc acctccatgc
2581 ctggctcctg gatggtcctg gaggggcctg cagtgtctcc attccccaag ctgctcctgc
2641 tggcacttcg cttctgtggc cttggcattg agggcacagg ctggacacag gaatgggggc
2701 gcctccagag ggtctctccg tcctcatgct cctcagtgtc cacacttcaa ggccaaggat
2761 agtttcttcc tctgacatgg ggaccataac aggtgatcac tgatacctgg caaagactgg
2821 ggccctctcc tttctatgtc ctcaatcctg cctgactctt ggtccttctg gcagggacct
2881 ggctggggaa cgttctggtg ctgatggtgc tgggacctat atgtatattt atatatatct
2941 ggggtcttgt ctaccacctc ccctggtcag agcctgagtg ggtgctggtt gctgtgtctt
3001 gtctgtaaat aaactcctat catgcctttt aaaaaaaaaa aaaaa
//