LOCUS BC038950 1633 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens apolipoprotein L, 6, mRNA (cDNA clone MGC:47573 IMAGE:5552006), complete cds. ACCESSION BC038950 VERSION BC038950.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1633) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1633) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC038950.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: g Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22035660. FEATURES Location/Qualifiers source 1..1633 /db_xref="H-InvDB:HIT000052091" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47573 IMAGE:5552006" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1633 /gene="APOL6" /gene_synonym="APOL-VI" /db_xref="GeneID:80830" /db_xref="MIM:607256" CDS 225..1256 /gene="APOL6" /gene_synonym="APOL-VI" /codon_start=1 /product="APOL6 protein" /protein_id="AAH38950.2" /db_xref="GeneID:80830" /db_xref="MIM:607256" /translation="MDNQAERESEAGVGLQRDEDDAPLCEDVELQDGDLSPEEKIFLR EFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAVISGVMSLLGLALAPAT GGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDILPTYDQEDREDEEEK ADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLTTGQVSSRSRVQV QKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTKFAEELRAKAL ELERKLTELTQLYKSLQQKVRSRARGVGKDLTGTCETEAYWKELREHVWMWLWLCVCL CVCVYVQFT" BASE COUNT 426 a 390 c 459 g 358 t ORIGIN 1 gttttgcaat caattcctgt tcaaaggcca ccctactctt cctatccgtc tttctccagc 61 ccagacactc acagccccct gccagaccag gggacctcgg agaggcaagg acagaggttc 121 aggatcttcc tctccctcgg gacccaaggc cacaaaggag agctccgtgg agagaagaaa 181 atcatttgac tcctggggac acagatttgc tgccacagag gctgatggac aaccaggcgg 241 agagagaaag tgaggctggt gttggtttgc aaagggatga ggatgacgct cctctgtgtg 301 aagacgtgga gctacaagac ggagatctgt cccccgaaga aaaaatattt ttgagagaat 361 ttcccagatt gaaagaagat ctgaaaggga acattgacaa gctccgtgcc ctcgcagacg 421 atattgacaa aacccacaag aaattcacca aggctaacat ggtggccacc tctactgctg 481 tcatctctgg agtgatgagc ctcctgggtt tagcccttgc cccagcaaca ggaggaggaa 541 gcctgctgct ctccaccgct ggtcaaggtt tggcaacagc agctggggtc accagcatcg 601 tgagtggtac gttggaacgc tccaaaaata aagaagccca agcacgggcg gaagacatac 661 tgcccaccta cgaccaagag gacagggagg atgaggaaga gaaggcagac tatgtcacag 721 ctgctggaaa gattatctat aatcttagaa acaccttgaa gtatgccaag aaaaacgtcc 781 gtgcattttg gaaactcaga gccaacccac gcttggccaa tgctaccaag cgtcttctga 841 ccactggcca agtctcctcc cggagccgcg tgcaggtgca aaaggccttt gcgggaacaa 901 cactggcgat gaccaaaaat gctcgcgtgc tgggaggtgt gatgtccgcc ttctcccttg 961 gctatgactt ggccactctc tcaaaggaat ggaagcacct gaaggaagga gcaaggacaa 1021 agtttgcgga agagttgaga gccaaggcct tggagctgga gaggaaactc acagaactca 1081 cccagctcta caagagcttg cagcagaaag tgaggtcaag ggccagaggg gtggggaagg 1141 atttaactgg gacctgcgaa accgaggctt actggaagga gttaagggag catgtgtgga 1201 tgtggctgtg gctgtgtgtg tgtctgtgtg tctgtgtgta tgtacagttt acatgaatgt 1261 tcctcaggac atggcataca atggccttgg aggtccaaat aatatcaagt acatcttgga 1321 gatgagggtg cctgtcctgg acagacctcg gcatgccttc tgtttctcct tcaatgctcc 1381 ttaaggccta tgtgctggga aaagggtctt ccctgtttgt ttgtttgttt gtttgtttgt 1441 ttgttttgag acggggtctc tgttgcccag gctggagtgc agtggcgtaa tctcggctca 1501 ctgcaacctc tgcctcctga gtgcaggaga atcgcttgaa cccaggctgt aggggttgca 1561 gtgagccggg atcatgccac tgcactccag tctgggtgtc agaatgagac cccatctcaa 1621 aaaaaaaaaa aaa //