LOCUS BC038950 1633 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens apolipoprotein L, 6, mRNA (cDNA clone MGC:47573
IMAGE:5552006), complete cds.
ACCESSION BC038950
VERSION BC038950.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1633)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1633)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC038950.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22035660.
FEATURES Location/Qualifiers
source 1..1633
/db_xref="H-InvDB:HIT000052091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47573 IMAGE:5552006"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1633
/gene="APOL6"
/gene_synonym="APOL-VI"
/db_xref="GeneID:80830"
/db_xref="MIM:607256"
CDS 225..1256
/gene="APOL6"
/gene_synonym="APOL-VI"
/codon_start=1
/product="APOL6 protein"
/protein_id="AAH38950.2"
/db_xref="GeneID:80830"
/db_xref="MIM:607256"
/translation="MDNQAERESEAGVGLQRDEDDAPLCEDVELQDGDLSPEEKIFLR
EFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAVISGVMSLLGLALAPAT
GGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDILPTYDQEDREDEEEK
ADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLTTGQVSSRSRVQV
QKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTKFAEELRAKAL
ELERKLTELTQLYKSLQQKVRSRARGVGKDLTGTCETEAYWKELREHVWMWLWLCVCL
CVCVYVQFT"
BASE COUNT 426 a 390 c 459 g 358 t
ORIGIN
1 gttttgcaat caattcctgt tcaaaggcca ccctactctt cctatccgtc tttctccagc
61 ccagacactc acagccccct gccagaccag gggacctcgg agaggcaagg acagaggttc
121 aggatcttcc tctccctcgg gacccaaggc cacaaaggag agctccgtgg agagaagaaa
181 atcatttgac tcctggggac acagatttgc tgccacagag gctgatggac aaccaggcgg
241 agagagaaag tgaggctggt gttggtttgc aaagggatga ggatgacgct cctctgtgtg
301 aagacgtgga gctacaagac ggagatctgt cccccgaaga aaaaatattt ttgagagaat
361 ttcccagatt gaaagaagat ctgaaaggga acattgacaa gctccgtgcc ctcgcagacg
421 atattgacaa aacccacaag aaattcacca aggctaacat ggtggccacc tctactgctg
481 tcatctctgg agtgatgagc ctcctgggtt tagcccttgc cccagcaaca ggaggaggaa
541 gcctgctgct ctccaccgct ggtcaaggtt tggcaacagc agctggggtc accagcatcg
601 tgagtggtac gttggaacgc tccaaaaata aagaagccca agcacgggcg gaagacatac
661 tgcccaccta cgaccaagag gacagggagg atgaggaaga gaaggcagac tatgtcacag
721 ctgctggaaa gattatctat aatcttagaa acaccttgaa gtatgccaag aaaaacgtcc
781 gtgcattttg gaaactcaga gccaacccac gcttggccaa tgctaccaag cgtcttctga
841 ccactggcca agtctcctcc cggagccgcg tgcaggtgca aaaggccttt gcgggaacaa
901 cactggcgat gaccaaaaat gctcgcgtgc tgggaggtgt gatgtccgcc ttctcccttg
961 gctatgactt ggccactctc tcaaaggaat ggaagcacct gaaggaagga gcaaggacaa
1021 agtttgcgga agagttgaga gccaaggcct tggagctgga gaggaaactc acagaactca
1081 cccagctcta caagagcttg cagcagaaag tgaggtcaag ggccagaggg gtggggaagg
1141 atttaactgg gacctgcgaa accgaggctt actggaagga gttaagggag catgtgtgga
1201 tgtggctgtg gctgtgtgtg tgtctgtgtg tctgtgtgta tgtacagttt acatgaatgt
1261 tcctcaggac atggcataca atggccttgg aggtccaaat aatatcaagt acatcttgga
1321 gatgagggtg cctgtcctgg acagacctcg gcatgccttc tgtttctcct tcaatgctcc
1381 ttaaggccta tgtgctggga aaagggtctt ccctgtttgt ttgtttgttt gtttgtttgt
1441 ttgttttgag acggggtctc tgttgcccag gctggagtgc agtggcgtaa tctcggctca
1501 ctgcaacctc tgcctcctga gtgcaggaga atcgcttgaa cccaggctgt aggggttgca
1561 gtgagccggg atcatgccac tgcactccag tctgggtgtc agaatgagac cccatctcaa
1621 aaaaaaaaaa aaa
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