LOCUS BC038934 1805 bp mRNA linear HUM 12-NOV-2007 DEFINITION Homo sapiens gap junction protein, beta 6, 30kDa, mRNA (cDNA clone MGC:45195 IMAGE:5196769), complete cds. ACCESSION BC038934 VERSION BC038934.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1805) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1805) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: m Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254836. FEATURES Location/Qualifiers source 1..1805 /db_xref="H-InvDB:HIT000052089" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45195 IMAGE:5196769" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1805 /gene="GJB6" /gene_synonym="CX30" /gene_synonym="EDH" /gene_synonym="HED" /db_xref="GeneID:10804" /db_xref="HGNC:HGNC:4288" /db_xref="MIM:604418" CDS 249..1034 /gene="GJB6" /gene_synonym="CX30" /gene_synonym="EDH" /gene_synonym="HED" /codon_start=1 /product="gap junction protein, beta 6, 30kDa" /protein_id="AAH38934.1" /db_xref="GeneID:10804" /db_xref="HGNC:HGNC:4288" /db_xref="MIM:604418" /translation="MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVW GDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHET TRKFRRGEKRNDFKDIEDIKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNG YHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVC FRRSKRAQTQKNHPNHALKESKQNEMNELISDSGQNAITGFPS" BASE COUNT 525 a 365 c 405 g 510 t ORIGIN 1 ctgggaagac gctggtcagt tcacctgccc cactggttgt tttttaaaca aattctgata 61 caggcgacat cctcactgac cgagcaaaga ttgacattcg tatcatcact gtgcaccatt 121 ggcttctagg cactccagtg gggtaggaga aggaggtctg aaaccctcgc agagggatct 181 tgccctcatt ctttgggtct gaaacactgg cagtcgttgg aaacaggact cagggataaa 241 ccagcgcaat ggattggggg acgctgcaca ctttcatcgg gggtgtcaac aaacactcca 301 ccagcatcgg gaaggtgtgg atcacagtca tctttatttt ccgagtcatg atcctcgtgg 361 tggctgccca ggaagtgtgg ggtgacgagc aagaggactt cgtctgcaac acactgcaac 421 cgggatgcaa aaatgtgtgc tatgaccact ttttcccggt gtcccacatc cggctgtggg 481 ccctccagct gatcttcgtc tccaccccag cgctgctggt ggccatgcat gtggcctact 541 acaggcacga aaccactcgc aagttcaggc gaggagagaa gaggaatgat ttcaaagaca 601 tagaggacat taaaaagcag aaggttcgga tagaggggtc gctgtggtgg acgtacacca 661 gcagcatctt tttccgaatc atctttgaag cagcctttat gtatgtgttt tacttccttt 721 acaatgggta ccacctgccc tgggtgttga aatgtgggat tgacccctgc cccaaccttg 781 ttgactgctt tatttctagg ccaacagaga agaccgtgtt taccattttt atgatttctg 841 cgtctgtgat ttgcatgctg cttaacgtgg cagagttgtg ctacctgctg ctgaaagtgt 901 gttttaggag atcaaagaga gcacagacgc aaaaaaatca ccccaatcat gccctaaagg 961 agagtaagca gaatgaaatg aatgagctga tttcagatag tggtcaaaat gcaatcacag 1021 gtttcccaag ctaaacattt caaggtaaaa tgtagctgcg tcataaggag acttctgtct 1081 tctccagaag gcaataccaa cctgaaagtt ccttctgtag cctgaagagt ttgtaaatga 1141 ctttcataat aaatagacac ttgagttaac tttttgtagg atacttgctc cattcataca 1201 caacgtaatc aaatatgtgg tccatctctg aaaacaagag actgcttgac aaaggagcat 1261 tgcagtcact ttgacaggtt ccttttaagt ggactctctg acaaagtggg tactttctga 1321 aaatttatat aactgttgtt gataaggaac atttatccag gaattgatac ttttattagg 1381 aaaagatatt tttataggct tggatgtttt tagttctgac tttgaattta tataaagtat 1441 ttttataatg actggtcttc cttacctgga aaaacatgcg atgttagttt tagaattaca 1501 ccacaagtat ctaaatttgg aacttacaaa gggtctatct tgtaaatatt gttttgcatt 1561 gtctgttggc aaatttgtga actgtcatga tacgcttaag gtggaaagtg ttcattgcac 1621 aatatatttt tactgctttc tgaatgtaga cggaacagtg tggaagcaga aggctttttt 1681 aactcatccg tttgccaatc attgcaaaca actgaaatgt ggatgtgatt gcctcaataa 1741 agctcgtccc cattgcttaa gccttcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1801 aaaaa //