LOCUS BC038934 1805 bp mRNA linear HUM 12-NOV-2007
DEFINITION Homo sapiens gap junction protein, beta 6, 30kDa, mRNA (cDNA clone
MGC:45195 IMAGE:5196769), complete cds.
ACCESSION BC038934
VERSION BC038934.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254836.
FEATURES Location/Qualifiers
source 1..1805
/db_xref="H-InvDB:HIT000052089"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45195 IMAGE:5196769"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1805
/gene="GJB6"
/gene_synonym="CX30"
/gene_synonym="EDH"
/gene_synonym="HED"
/db_xref="GeneID:10804"
/db_xref="HGNC:HGNC:4288"
/db_xref="MIM:604418"
CDS 249..1034
/gene="GJB6"
/gene_synonym="CX30"
/gene_synonym="EDH"
/gene_synonym="HED"
/codon_start=1
/product="gap junction protein, beta 6, 30kDa"
/protein_id="AAH38934.1"
/db_xref="GeneID:10804"
/db_xref="HGNC:HGNC:4288"
/db_xref="MIM:604418"
/translation="MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVW
GDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHET
TRKFRRGEKRNDFKDIEDIKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNG
YHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVC
FRRSKRAQTQKNHPNHALKESKQNEMNELISDSGQNAITGFPS"
BASE COUNT 525 a 365 c 405 g 510 t
ORIGIN
1 ctgggaagac gctggtcagt tcacctgccc cactggttgt tttttaaaca aattctgata
61 caggcgacat cctcactgac cgagcaaaga ttgacattcg tatcatcact gtgcaccatt
121 ggcttctagg cactccagtg gggtaggaga aggaggtctg aaaccctcgc agagggatct
181 tgccctcatt ctttgggtct gaaacactgg cagtcgttgg aaacaggact cagggataaa
241 ccagcgcaat ggattggggg acgctgcaca ctttcatcgg gggtgtcaac aaacactcca
301 ccagcatcgg gaaggtgtgg atcacagtca tctttatttt ccgagtcatg atcctcgtgg
361 tggctgccca ggaagtgtgg ggtgacgagc aagaggactt cgtctgcaac acactgcaac
421 cgggatgcaa aaatgtgtgc tatgaccact ttttcccggt gtcccacatc cggctgtggg
481 ccctccagct gatcttcgtc tccaccccag cgctgctggt ggccatgcat gtggcctact
541 acaggcacga aaccactcgc aagttcaggc gaggagagaa gaggaatgat ttcaaagaca
601 tagaggacat taaaaagcag aaggttcgga tagaggggtc gctgtggtgg acgtacacca
661 gcagcatctt tttccgaatc atctttgaag cagcctttat gtatgtgttt tacttccttt
721 acaatgggta ccacctgccc tgggtgttga aatgtgggat tgacccctgc cccaaccttg
781 ttgactgctt tatttctagg ccaacagaga agaccgtgtt taccattttt atgatttctg
841 cgtctgtgat ttgcatgctg cttaacgtgg cagagttgtg ctacctgctg ctgaaagtgt
901 gttttaggag atcaaagaga gcacagacgc aaaaaaatca ccccaatcat gccctaaagg
961 agagtaagca gaatgaaatg aatgagctga tttcagatag tggtcaaaat gcaatcacag
1021 gtttcccaag ctaaacattt caaggtaaaa tgtagctgcg tcataaggag acttctgtct
1081 tctccagaag gcaataccaa cctgaaagtt ccttctgtag cctgaagagt ttgtaaatga
1141 ctttcataat aaatagacac ttgagttaac tttttgtagg atacttgctc cattcataca
1201 caacgtaatc aaatatgtgg tccatctctg aaaacaagag actgcttgac aaaggagcat
1261 tgcagtcact ttgacaggtt ccttttaagt ggactctctg acaaagtggg tactttctga
1321 aaatttatat aactgttgtt gataaggaac atttatccag gaattgatac ttttattagg
1381 aaaagatatt tttataggct tggatgtttt tagttctgac tttgaattta tataaagtat
1441 ttttataatg actggtcttc cttacctgga aaaacatgcg atgttagttt tagaattaca
1501 ccacaagtat ctaaatttgg aacttacaaa gggtctatct tgtaaatatt gttttgcatt
1561 gtctgttggc aaatttgtga actgtcatga tacgcttaag gtggaaagtg ttcattgcac
1621 aatatatttt tactgctttc tgaatgtaga cggaacagtg tggaagcaga aggctttttt
1681 aactcatccg tttgccaatc attgcaaaca actgaaatgt ggatgtgatt gcctcaataa
1741 agctcgtccc cattgcttaa gccttcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaa
//