LOCUS       BC038808                2455 bp    mRNA    linear   HUM 30-JAN-2008
DEFINITION  Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic
            polypeptide-like 3F, mRNA (cDNA clone MGC:46498 IMAGE:5227163),
            complete cds.
ACCESSION   BC038808
VERSION     BC038808.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2455)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 78 Row: h Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 13399303.
FEATURES             Location/Qualifiers
     source          1..2455
                     /db_xref="H-InvDB:HIT000052073"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:46498 IMAGE:5227163"
                     /tissue_type="Pancreas, Spleen, adult pooled"
                     /clone_lib="NIH_MGC_120"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2455
                     /gene="APOBEC3F"
                     /gene_synonym="ARP8"
                     /gene_synonym="BK150C2.4.MRNA"
                     /gene_synonym="KA6"
                     /db_xref="GeneID:200316"
                     /db_xref="HGNC:HGNC:17356"
                     /db_xref="MIM:608993"
     CDS             79..1200
                     /gene="APOBEC3F"
                     /gene_synonym="ARP8"
                     /gene_synonym="BK150C2.4.MRNA"
                     /gene_synonym="KA6"
                     /codon_start=1
                     /product="apolipoprotein B mRNA editing enzyme, catalytic
                     polypeptide-like 3F"
                     /protein_id="AAH38808.1"
                     /db_xref="GeneID:200316"
                     /db_xref="HGNC:HGNC:17356"
                     /db_xref="MIM:608993"
                     /translation="MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVKTKGP
                     SRPRLDAKIFRGQVYSQPEHHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAK
                     LAEFLSEHPNVTLTISAARLYYYWERDYRRALCRLSQAGARVKIMDDEEFAYCWENFV
                     YSEGQPFMPWYKFDDNYAFLHRTLKEILRNPMEAMYPHIFYFHFKNLRKAYGRNESWL
                     CFTMEVVKHHSPISWKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTS
                     WSPCPECAGEVAEFLARHSNVNLTIFTARLYYFWDTDYQEGLRSLSQEGASVEIMGYK
                     DFKYCWENFVYNDDEPFKPWKGLKYNFLFLDSKLQEILE"
BASE COUNT          640 a          664 c          565 g          586 t
ORIGIN      
        1 tgaaacctgg agcctggagc agaaagtgaa accctggtgc tccagacaaa gatcttagtc
       61 gggactagcc ggccaaggat gaagcctcac ttcagaaaca cagtggagcg aatgtatcga
      121 gacacattct cctacaactt ttataataga cccatccttt ctcgtcggaa taccgtctgg
      181 ctgtgctacg aagtgaaaac aaagggtccc tcaaggcccc gtttggacgc aaagatcttt
      241 cgaggccagg tgtattccca gcctgagcac cacgcagaaa tgtgcttcct ctcttggttc
      301 tgtggcaacc agctgcctgc ttacaagtgt ttccagatca cctggtttgt atcctggacc
      361 ccctgcccgg actgtgtggc gaagctggcc gaattcctgt ctgagcaccc caatgtcacc
      421 ctgaccatct ccgccgcccg cctctactac tactgggaaa gagattaccg aagggcgctc
      481 tgcaggctga gtcaggcagg ggcccgtgtg aagattatgg acgatgaaga atttgcatac
      541 tgctgggaaa actttgtgta cagtgaaggt cagccattca tgccttggta caaattcgat
      601 gacaattatg cattcctgca ccgcacgcta aaggagattc tcagaaaccc gatggaggca
      661 atgtatccac acatattcta cttccacttt aaaaacctac gcaaagccta tggtcggaac
      721 gaaagctggc tgtgcttcac catggaagtt gtaaagcacc actcacctat ctcctggaag
      781 aggggcgtct tccgaaacca ggtggatcct gagacccatt gtcatgcaga aaggtgcttc
      841 ctctcttggt tctgtgacga catactgtct cctaacacaa actacgaggt cacctggtac
      901 acatcttgga gcccttgccc agagtgtgca ggggaggtgg ccgagttcct ggccaggcac
      961 agcaacgtga atctcaccat cttcaccgcc cgcctctact acttctggga tacagattac
     1021 caggaggggc tccgcagcct gagtcaggaa ggggcctccg tggagatcat gggctacaaa
     1081 gattttaaat attgttggga aaactttgtg tacaatgatg atgagccatt caagccttgg
     1141 aaaggactaa aatacaactt tctattcctg gacagcaagc tgcaggagat tctcgagtga
     1201 ggggtctccc agggcctcat ggtctgtctc ctctagcctc ctgctcatgc tgtgcaggcc
     1261 tcccctccat cctggaccag ctgtgctttt gcctggtcat cctgagcccc tcctggcctc
     1321 agggccattc catagtgctc ccctgcctca ccacctcctc tccgctctcc caggttcttc
     1381 ctgcagaggc ctctttctgc ctccatggct atccatccac ccaccaagac cctgttccct
     1441 gagcctgcat gcccctaacc tgccttttcc catctcccca gcataaccta attttttttt
     1501 ttttttttga gatggaattt cgctctgtca cccagactgg agtgcaatgg cttgatcttg
     1561 gctcactgca aactctgcct accaggttca agcgattctc ctgcctccgc ctcccgagta
     1621 gctggaatta cagacgcctg ccatcacgca cagctaactt tttttttttt gtatttttag
     1681 tagtgactgg gtttcaccat gttggccagg ctggtcttga actcctgacc tcaggtgatc
     1741 cgcctatctc agcctcccaa agtgctggga ttacaggcgt gagccactgg cccggcggca
     1801 caaccaaatc ttattaaact caccctaggc tggccgcggt gactcatgcc tgtaatcccc
     1861 cagcaatttg ggaggcagag gtgagagaat cgcttgagcc caggaattcg agaccagcct
     1921 gggccacatg acaaagcccc atctctacaa aaaaattaca aaaaaaaaaa aaacaggtgt
     1981 ggtggcatgc acctgtagtt taagctgctt ggaaggatga agtgggagga ttgcttgagc
     2041 cggggaggtg gaggctgcag tgaactgaga tcacgtcact gaactccagt ctgagcaaca
     2101 gatcgagacc ctgcctgaaa ataaatcaat aaataaactc aaccgaaatg ggcatgaaag
     2161 ttgaaatggg tatgtaagtt gaaaaccaga agttttgaga aacatccttt gttaactttc
     2221 atcctacaaa ttgggtcatt catgtcctac gcagctaaaa cagagcccag gagccaggga
     2281 ggaaaagcag tcaggccaca caccattgct cccaaaatgg acttctctgc aagcctgact
     2341 cctgaaactg tgcattgtac cctgaaacca gctttatcca tagcttctgc aataaatggc
     2401 tgtaagtctt ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//