LOCUS BC038417 3915 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 30, mRNA (cDNA clone MGC:34339 IMAGE:5171702), complete cds. ACCESSION BC038417 VERSION BC038417.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3915) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3915) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: f Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20336289. FEATURES Location/Qualifiers source 1..3915 /db_xref="H-InvDB:HIT000095198" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34339 IMAGE:5171702" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3915 /gene="DHX30" /gene_synonym="FLJ11214" /gene_synonym="KIAA0890" /db_xref="GeneID:22907" /db_xref="HGNC:HGNC:16716" CDS 320..3787 /gene="DHX30" /gene_synonym="FLJ11214" /gene_synonym="KIAA0890" /codon_start=1 /product="DEAH (Asp-Glu-Ala-His) box polypeptide 30" /protein_id="AAH38417.1" /db_xref="GeneID:22907" /db_xref="HGNC:HGNC:16716" /translation="MAASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGPK KKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRV LADRFGSPADSWWRPEPTMPPTSWRQLNPESIRPGGPGGLSRSLGREEEEDEEEELEE GTIDVTDFLSMTQQDSHAPLRDSRGSSFEMTDDDSAIRALTQFPLPKNLLAKVIQIAT SSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSL GLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIETFLNHYPVESSWIA PELRLQSDDILPLGKDSGPLSDPITGKPYVPLLEAEEVRLSQSLLELWRRRGPVWQEA PQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIIT QPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG CPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHID ARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPP VGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR RGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLS KAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRC LHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ DRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEE EELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRL RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLR LEGDSRTVRLLKELRRALGRMVERSLRSELAALPPSVQEEHGQLLALLAELLRGPCGS FDVRKTADD" BASE COUNT 907 a 1132 c 1132 g 744 t ORIGIN 1 ccgcggttca tgcgcggtgc acagaggctt gtttcacatc tgtaacaaca ggaggaggcc 61 cagcctcgtg atgaggaata gcaaggagag aattcagctc cagttcaaaa gcctacaaaa 121 tctgagactg tcattgcttt tataaggatt ccagctttcc ctcctggcca gaaatgttca 181 gcctggactc attcagaaaa gatcgggccc agcacaggca gcgtcagtgc aaacttcccc 241 caccccgcct tccacccatg tgtgtcaacc ctaccccagg agggaccatc tctcgaggct 301 gaacgttaac atttccaaca tggcagcttc tagggaccta ttaaaagagt tcccacagcc 361 caaaaatctt ctcaacagtg tgattggaag agccctcggc atctcacatg caaaagacaa 421 actagtctac gtgcacacaa atggaccgaa gaaaaagaaa gtcacactgc acataaaatg 481 gcccaagagc gtggaggtag aaggctatgg cagcaagaag atcgatgctg agcggcaggc 541 tgcagctgca gcctgccagc tgttcaaggg ttggggtctg ctaggtcccc ggaatgagtt 601 gtttgacgca gccaaatacc gagtgctagc tgatcgcttt ggctcccctg ccgacagctg 661 gtggcgtccg gaacccacca tgccccctac ttcctggcgg cagctgaatc cagagagtat 721 tcgaccaggg ggacctgggg gcctatcccg ctctttaggc cgggaagaag aggaggacga 781 ggaggaagag ctagaagaag ggaccataga tgttaccgac ttcttgtcca tgacccagca 841 ggattcccac gctccactca gggactcaag ggggagttcc tttgagatga cagatgacga 901 cagtgccatt agggctctga cccagtttcc acttcccaag aaccttctgg ccaaggtgat 961 tcagattgca acgtcatcct ccacagctaa gaacctcatg cagttccata ctgtgggcac 1021 caagaccaag ctgtctacac tcaccctgct ctggccctgc cccatgacct ttgttgccaa 1081 agggcgccgc aaagcagagg ctgagaataa ggcggcagcc ttggcctgca agaaactgaa 1141 gagcctgggc ctggtggaca ggaacaacga accgcttaca cacgccatgt ataacctggc 1201 ctctttgcgt gagctgggtg agacccagcg ccgaccatgc accatccagg tgcccgagcc 1261 catcctccgc aagatagaga ccttcctgaa ccattaccct gtggagagtt catggatcgc 1321 cccagaactc cggctgcaga gtgatgacat cttgcccttg ggcaaggact cagggcctct 1381 gagtgaccct atcacaggca agccctatgt gcccctgttg gaagcagagg aggtacgtct 1441 cagccagagt ctgctagaac tgtggcggcg gcgagggccg gtctggcagg aggcccccca 1501 gctacctgtg gacccacatc gggacaccat cctcaacgcc attgagcagc acccggtggt 1561 ggtcatctct ggggacacgg gctgtgggaa gaccacgcgc atcccccagc tgttgctgga 1621 gcgctatgtg accgagggcc gaggtgcccg ctgcaatgtt atcatcaccc aacctcgccg 1681 catctctgct gtgtctgtgg cacagcgggt cagccacgaa ctgggcccct ccctgcgccg 1741 gaatgtgggc ttccaggtgc ggttggaaag taagccccca tcccgaggcg gggccctgct 1801 cttctgcact gtgggtatcc tgctgcgtaa gctgcagagc aaccccagcc tggagggcgt 1861 gagccacgtc atcgtggatg aggtgcatga gcgggacgtg aacacagact ttctgctgat 1921 cctgctcaag ggcctgcagc ggctcaaccc ggccctgcgg ctggtgctca tgagtgccac 1981 aggggacaat gagcgcttct cccgatactt tggtggctgc cccgtcatca aggtgcctgg 2041 cttcatgtac ccagtcaagg agcactacct agaggacatc ctggccaagt tgggcaagca 2101 ccagtacctg caccggcacc ggcaccatga gtctgaggat gaatgcgcac tcgatttgga 2161 ccttgtgact gatctggttc tgcacatcga tgctcgcggg gaaccaggtg ggatcctgtg 2221 cttcctgcct gggtggcagg agatcaaagg agtgcagcag cgcctccagg aggccctggg 2281 catgcacgag agcaagtacc tcatcctgcc agtgcactcc aacatcccca tgatggatca 2341 gaaggccata ttccagcagc ctccagttgg ggtgcgcaag attgtcttgg ccaccaacat 2401 tgctgagact tccatcacaa tcaatgacat cgtgcatgtg gtggacagtg ggctgcacaa 2461 ggaagaacgc tatgacctga agaccaaggt gtcctgcctg gagacagtgt gggtatcaag 2521 agccaatgtg atccagcgcc ggggccgggc gggccgctgc cagtccggct ttgcctacca 2581 cttgttccct cgaagccggc tggagaaaat ggtccctttc caagtgccag agatcctgcg 2641 cacacctctt gagaacctgg tgctgcaagc gaaaatccac atgcctgaga agacggcggt 2701 ggagttcctg tccaaggctg tggacagtcc aaacatcaag gcagtggacg aggctgtgat 2761 cttgctccag gagatcgggg tgctggacca gcgggagtac ctgactaccc tggggcagcg 2821 cctggctcac atctccaccg acccccggtt ggccaaggcc attgtgttgg ctgccatctt 2881 ccgttgcctg cacccactac tggtggtcgt ttcctgcctc acccgggacc ccttcagcag 2941 cagcctacag aaccgggcag aggtggacaa ggtgaaagca ctgttgagcc atgacagcgg 3001 cagtgaccac ctggcctttg tgcgggctgt cgccggctgg gaggaggtgc tgcgttggca 3061 ggaccgcagc tcccgggaga attacctgga ggaaaacctg ctgtacgcac ccagcctgcg 3121 cttcatccac ggactcatca agcagttctc agagaacatt tatgaggcct tcctggtggg 3181 gaagccctcg gactgcaccc tggcctccgc ccagtgcaac gagtacagtg aggaggagga 3241 gctggtgaag ggcgtgctga tggccggcct ctaccccaac ctcatccagg tgaggcaggg 3301 caaggtcacc cggcagggga agttcaagcc caacagcgtc acatatagga ccaaatcagg 3361 caacatcctg ctgcacaagt cgaccattaa cagggaggcc acacggttac ggagccgatg 3421 gctgacgtat ttcatggcag tcaagtccaa tggcagcgtc ttcgtccggg actcctctca 3481 ggtgcacccg ctagctgtgc tgctgctgac cgacggggac gtgcacatcc gtgatgacgg 3541 gcgccgggcc accatctcac tgagcgacag tgacctgctg cggctggagg gtgactcgcg 3601 taccgtgcgg ctgctgaagg agctgcggcg ggccctgggc cgcatggtgg agcggagcct 3661 gcgcagcgag ctggctgcac ttccccccag cgtacaggag gagcacgggc agctgcttgc 3721 gctactggca gagctgctgc gaggaccctg tggcagcttt gatgtgcgca agacagctga 3781 cgactgagcc ctgcttctgc tggggctgtg tacagagtgc aaatgtttat ttaaaataaa 3841 gttctattta tcccttgtga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3901 aaaaaaaaaa aaaaa //