LOCUS BC037418 3536 bp mRNA linear HUM 23-AUG-2004 DEFINITION Homo sapiens ataxin 7-like 3, mRNA (cDNA clone IMAGE:5499446), partial cds. ACCESSION BC037418 VERSION BC037418.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3536) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3536) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (06-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 78 Row: n Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..3536 /db_xref="H-InvDB:HIT000094850" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5499446" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3536 /gene="ATXN7L3" /gene_synonym="DKFZp761G2113" /db_xref="GeneID:56970" CDS <1..1063 /gene="ATXN7L3" /gene_synonym="DKFZp761G2113" /codon_start=2 /product="ATXN7L3 protein" /protein_id="AAH37418.1" /db_xref="GeneID:56970" /translation="HASEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKC GYFFLDDTDPDSMKDFEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLE KCLGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKLW YLPFQNPNSPRRSKSLKHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVI SEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALIS RLQWDGSSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNK KKKPKPPAPPTPSIYDDIN" BASE COUNT 736 a 986 c 1010 g 804 t ORIGIN 1 ccacgcgtcc gaaatgtctt tgtctggcct ggataacagc aaactagagg ccatcgctca 61 ggagatatac gcggacctgg tcgaggattc ttgtttggga ttctgctttg aggtacaccg 121 ggctgtcaag tgtggctact tcttcttgga cgacacggac cctgatagca tgaaggattt 181 tgagatcgtg gaccagccgg gcttggacat ctttggacag gttttcaacc agtggaagag 241 caaggagtgt gtttgcccca attgcagtcg cagcattgcc gcctcccgct ttgctcccca 301 tctggagaag tgcctgggaa tgggtcggaa cagcagccga atcgccaacc gccggattgc 361 caatagcaac aatatgaata agtctgagag tgaccaagaa gataatgatg acatcaatga 421 caacgactgg tcctatggct cggagaagaa agccaagaag agaaagtcag acaagctatg 481 gtatctccca ttccagaacc ccaattcccc tcgaagatcc aagtcattaa aacacaaaaa 541 tggggaactt agcaattcgg atccttttaa gtataacaat tcaactggga tcagctatga 601 gaccctgggg ccggaggagc ttcgcagcct gctaaccacg caatgtgggg tgatttctga 661 acacaccaag aagatgtgca caaggtccct gcgctgccca cagcacacag atgagcagag 721 gcgaaccgta cggatttatt ttctcgggcc ctcggctgtc cttccagagg tcgagagctc 781 cctggataat gacagctttg acatgactga cagccaggcc ctgatcagcc ggcttcagtg 841 ggacggctcc tctgacctct caccctctga ttcaggctcc tccaagacga gtgaaaatca 901 gggatggggt ctaggtacca acagctctga gtcacggaaa accaagaaaa agaaatccca 961 tctgagcctg gtagggactg cctccggcct aggttccaac aagaagaaga agccaaagcc 1021 accggcaccc ccgacgccca gcatctatga tgacatcaac tgacttgggt gcaagggata 1081 gcctttggct gagcagagcc ctctctcctg acccccaccc aggtggcata gcctggcaaa 1141 tggacggctg ctgggggttg gggcttggga agcttggtgg gccaggcagg cagaggatcc 1201 gattatgcgc ccctgggggg tgtcaaagtc ctctgcaatg gagcacgact cctcggcgtg 1261 caggactcag acctggacat attatgcctt ggacataagt ttggtgggga ggcggttttc 1321 ctatttattc tgtgagttac tggatgtcca gctaggccag gggcctgacc tgggcactgt 1381 gccagggcac tgcctgcccc ccaccccagg aactggacta agccctgctg aggggcaatg 1441 tggcgacccg ggaggctgtg ggttggaagc tgagcctgga gggggcctgc ctcggccgcc 1501 ctcagcaatg tgaatgggtc cggtgcttgg agctgagggg caaggctggg catgtcctgt 1561 ctgtgtgcag aatcttatca aatgccccca gtcccagggg taggcaggca cagagtgctg 1621 tctgctgagg tgggcgtcca gaactgccgc caccttccct gcccctcaca ggggcagccc 1681 tttcccctca gtccccatgg gcctccttgg cagcaggagc tgtccttttg ttgggtgcca 1741 ggaaagggcc tccagcctct acagcttcaa gaaatgggaa agggagggta ggaagaggga 1801 gaagtgtcag aattcctccc cctgcctctc ctccctgacc cagggctggt gaggagtggg 1861 gccccaaggt gagagggaac ggtgctgctt tatttgaaat gttttcttac ctcattccct 1921 gccccaggaa gggacccagc ctcaccctcc tggggtggcc ccgtgttcct cctgcccacc 1981 ctgccccact gccctaccgg ggcagcccag gttcccaact gctgcttcca cccccttcac 2041 cttgactggc ttcagttcct ctcagcgctc ctgcctccaa agcgtgccct gtttcccttc 2101 cttagcgctt ttaagttatt tattctgtac ttgtggtttg gggctctgag gaaaatccta 2161 atcttgtgcc tctccccctt tgctaggagt tgggtgggaa gagagggtgg cctctgtgcc 2221 ccaggttgtc agtggagggg aaggggtgtc actgcccctc tgtgggactg tcatgccagt 2281 gtgcccacct gcctggtcta catcctaaag agatgtaccg tcccccctcc atgcgggcac 2341 caccactccc aggagccaag ctggaggacc gcgacctggg ctgggagcag agctgactga 2401 cacgggtgga ggtgaccctg agccaagttc tctggcactt gctggacatg tcccctaccc 2461 tcttcccaag aggagccatc ccacatttgg gtagttagta cccaggactg gttggactga 2521 tcgggttagg gaccctagag ggttaaggga acaacagaga tggggctgca atgccctgtc 2581 tggaactccg ctctcccgct ggggtggttc tgattgtggc tcatgcctgg ttgcaaattg 2641 gtttttaacc cacaaattgt gattattttt taaaaagcca aacagatttt ggcaggagtt 2701 agaataaatc ccggggcctg ggcttctcta ttcttggccc tccgtagtct ccctccgaga 2761 ggaggccaga gggagaggag gatctcagca ggcctctagc cgcttccaga tgcagtctgg 2821 ggagtgggct gaaggtgaag ggaggaaggc tgtgggccac tctcccttct gagaggcagc 2881 tgcagctcag gccctaatac actctttgcc ctgtggcctc tcccttttcc ccccttctgg 2941 ttggaggagg gagaagtggg aagtagcttg ggaactggtt tgtccacata aacttcccca 3001 ttgttccttg gcccgccctc agggcagagc cccctgccca ggctgggtaa gagatgggct 3061 tggtccagca gggaccctga gggaacaaac ccttttcctt ctggggagag agtgcccccc 3121 cctaccatgt agttgaacag gggctaggag ctccccactc ccctccctct aacagcaggc 3181 tgtgtgggtt tcaattccca tccttcccac cccggctagg tgtcgtccac cctgtatcct 3241 gtgtctgagt gtgtgtgggg gggttctgta ctaatttcca tggccggtgg cttttccttc 3301 catgcatcac tcccccccgc atgcccaggg gccacccgcc tggcattacc gcatgctggg 3361 gtcattgggg gaggggggtg gggctcacgc tgtcctgtgg tcttgagatt tttatttttg 3421 catatgtaat ccattctgta caggtagcta actttgtaaa cgctgtgtat tccctctgcc 3481 cccatggctg ctggtgtaaa taaactgcat ctcccgttgg taaaaaaaaa aaaaaa //