LOCUS BC037418 3536 bp mRNA linear HUM 23-AUG-2004
DEFINITION Homo sapiens ataxin 7-like 3, mRNA (cDNA clone IMAGE:5499446),
partial cds.
ACCESSION BC037418
VERSION BC037418.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3536)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (06-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3536
/db_xref="H-InvDB:HIT000094850"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5499446"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3536
/gene="ATXN7L3"
/gene_synonym="DKFZp761G2113"
/db_xref="GeneID:56970"
CDS <1..1063
/gene="ATXN7L3"
/gene_synonym="DKFZp761G2113"
/codon_start=2
/product="ATXN7L3 protein"
/protein_id="AAH37418.1"
/db_xref="GeneID:56970"
/translation="HASEMSLSGLDNSKLEAIAQEIYADLVEDSCLGFCFEVHRAVKC
GYFFLDDTDPDSMKDFEIVDQPGLDIFGQVFNQWKSKECVCPNCSRSIAASRFAPHLE
KCLGMGRNSSRIANRRIANSNNMNKSESDQEDNDDINDNDWSYGSEKKAKKRKSDKLW
YLPFQNPNSPRRSKSLKHKNGELSNSDPFKYNNSTGISYETLGPEELRSLLTTQCGVI
SEHTKKMCTRSLRCPQHTDEQRRTVRIYFLGPSAVLPEVESSLDNDSFDMTDSQALIS
RLQWDGSSDLSPSDSGSSKTSENQGWGLGTNSSESRKTKKKKSHLSLVGTASGLGSNK
KKKPKPPAPPTPSIYDDIN"
BASE COUNT 736 a 986 c 1010 g 804 t
ORIGIN
1 ccacgcgtcc gaaatgtctt tgtctggcct ggataacagc aaactagagg ccatcgctca
61 ggagatatac gcggacctgg tcgaggattc ttgtttggga ttctgctttg aggtacaccg
121 ggctgtcaag tgtggctact tcttcttgga cgacacggac cctgatagca tgaaggattt
181 tgagatcgtg gaccagccgg gcttggacat ctttggacag gttttcaacc agtggaagag
241 caaggagtgt gtttgcccca attgcagtcg cagcattgcc gcctcccgct ttgctcccca
301 tctggagaag tgcctgggaa tgggtcggaa cagcagccga atcgccaacc gccggattgc
361 caatagcaac aatatgaata agtctgagag tgaccaagaa gataatgatg acatcaatga
421 caacgactgg tcctatggct cggagaagaa agccaagaag agaaagtcag acaagctatg
481 gtatctccca ttccagaacc ccaattcccc tcgaagatcc aagtcattaa aacacaaaaa
541 tggggaactt agcaattcgg atccttttaa gtataacaat tcaactggga tcagctatga
601 gaccctgggg ccggaggagc ttcgcagcct gctaaccacg caatgtgggg tgatttctga
661 acacaccaag aagatgtgca caaggtccct gcgctgccca cagcacacag atgagcagag
721 gcgaaccgta cggatttatt ttctcgggcc ctcggctgtc cttccagagg tcgagagctc
781 cctggataat gacagctttg acatgactga cagccaggcc ctgatcagcc ggcttcagtg
841 ggacggctcc tctgacctct caccctctga ttcaggctcc tccaagacga gtgaaaatca
901 gggatggggt ctaggtacca acagctctga gtcacggaaa accaagaaaa agaaatccca
961 tctgagcctg gtagggactg cctccggcct aggttccaac aagaagaaga agccaaagcc
1021 accggcaccc ccgacgccca gcatctatga tgacatcaac tgacttgggt gcaagggata
1081 gcctttggct gagcagagcc ctctctcctg acccccaccc aggtggcata gcctggcaaa
1141 tggacggctg ctgggggttg gggcttggga agcttggtgg gccaggcagg cagaggatcc
1201 gattatgcgc ccctgggggg tgtcaaagtc ctctgcaatg gagcacgact cctcggcgtg
1261 caggactcag acctggacat attatgcctt ggacataagt ttggtgggga ggcggttttc
1321 ctatttattc tgtgagttac tggatgtcca gctaggccag gggcctgacc tgggcactgt
1381 gccagggcac tgcctgcccc ccaccccagg aactggacta agccctgctg aggggcaatg
1441 tggcgacccg ggaggctgtg ggttggaagc tgagcctgga gggggcctgc ctcggccgcc
1501 ctcagcaatg tgaatgggtc cggtgcttgg agctgagggg caaggctggg catgtcctgt
1561 ctgtgtgcag aatcttatca aatgccccca gtcccagggg taggcaggca cagagtgctg
1621 tctgctgagg tgggcgtcca gaactgccgc caccttccct gcccctcaca ggggcagccc
1681 tttcccctca gtccccatgg gcctccttgg cagcaggagc tgtccttttg ttgggtgcca
1741 ggaaagggcc tccagcctct acagcttcaa gaaatgggaa agggagggta ggaagaggga
1801 gaagtgtcag aattcctccc cctgcctctc ctccctgacc cagggctggt gaggagtggg
1861 gccccaaggt gagagggaac ggtgctgctt tatttgaaat gttttcttac ctcattccct
1921 gccccaggaa gggacccagc ctcaccctcc tggggtggcc ccgtgttcct cctgcccacc
1981 ctgccccact gccctaccgg ggcagcccag gttcccaact gctgcttcca cccccttcac
2041 cttgactggc ttcagttcct ctcagcgctc ctgcctccaa agcgtgccct gtttcccttc
2101 cttagcgctt ttaagttatt tattctgtac ttgtggtttg gggctctgag gaaaatccta
2161 atcttgtgcc tctccccctt tgctaggagt tgggtgggaa gagagggtgg cctctgtgcc
2221 ccaggttgtc agtggagggg aaggggtgtc actgcccctc tgtgggactg tcatgccagt
2281 gtgcccacct gcctggtcta catcctaaag agatgtaccg tcccccctcc atgcgggcac
2341 caccactccc aggagccaag ctggaggacc gcgacctggg ctgggagcag agctgactga
2401 cacgggtgga ggtgaccctg agccaagttc tctggcactt gctggacatg tcccctaccc
2461 tcttcccaag aggagccatc ccacatttgg gtagttagta cccaggactg gttggactga
2521 tcgggttagg gaccctagag ggttaaggga acaacagaga tggggctgca atgccctgtc
2581 tggaactccg ctctcccgct ggggtggttc tgattgtggc tcatgcctgg ttgcaaattg
2641 gtttttaacc cacaaattgt gattattttt taaaaagcca aacagatttt ggcaggagtt
2701 agaataaatc ccggggcctg ggcttctcta ttcttggccc tccgtagtct ccctccgaga
2761 ggaggccaga gggagaggag gatctcagca ggcctctagc cgcttccaga tgcagtctgg
2821 ggagtgggct gaaggtgaag ggaggaaggc tgtgggccac tctcccttct gagaggcagc
2881 tgcagctcag gccctaatac actctttgcc ctgtggcctc tcccttttcc ccccttctgg
2941 ttggaggagg gagaagtggg aagtagcttg ggaactggtt tgtccacata aacttcccca
3001 ttgttccttg gcccgccctc agggcagagc cccctgccca ggctgggtaa gagatgggct
3061 tggtccagca gggaccctga gggaacaaac ccttttcctt ctggggagag agtgcccccc
3121 cctaccatgt agttgaacag gggctaggag ctccccactc ccctccctct aacagcaggc
3181 tgtgtgggtt tcaattccca tccttcccac cccggctagg tgtcgtccac cctgtatcct
3241 gtgtctgagt gtgtgtgggg gggttctgta ctaatttcca tggccggtgg cttttccttc
3301 catgcatcac tcccccccgc atgcccaggg gccacccgcc tggcattacc gcatgctggg
3361 gtcattgggg gaggggggtg gggctcacgc tgtcctgtgg tcttgagatt tttatttttg
3421 catatgtaat ccattctgta caggtagcta actttgtaaa cgctgtgtat tccctctgcc
3481 cccatggctg ctggtgtaaa taaactgcat ctcccgttgg taaaaaaaaa aaaaaa
//