LOCUS BC037268 3629 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens protein kinase C, eta, mRNA (cDNA clone MGC:26269 IMAGE:4822159), complete cds. ACCESSION BC037268 VERSION BC037268.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3629) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3629) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: c Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47717140. FEATURES Location/Qualifiers source 1..3629 /db_xref="H-InvDB:HIT000051874" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26269 IMAGE:4822159" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3629 /gene="PRKCH" /gene_synonym="MGC26269" /gene_synonym="MGC5363" /gene_synonym="nPKC-eta" /gene_synonym="PKC-L" /gene_synonym="PKCL" /db_xref="GeneID:5583" /db_xref="HGNC:HGNC:9403" /db_xref="MIM:605437" CDS 389..2440 /gene="PRKCH" /gene_synonym="MGC26269" /gene_synonym="MGC5363" /gene_synonym="nPKC-eta" /gene_synonym="PKC-L" /gene_synonym="PKCL" /codon_start=1 /product="protein kinase C, eta" /protein_id="AAH37268.1" /db_xref="GeneID:5583" /db_xref="HGNC:HGNC:9403" /db_xref="MIM:605437" /translation="MSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPY LTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDGGHLELAVFHETPLGYDHFVANCT LQFQELLRTTGASDTFEGWVDLEPEGKVFVVITLTGSFTEATLQRDRIFKHFTRKRQR AMRRRVHQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLI VTACTCQNNINKVDSKIAEQRFGINIPHKFSIHNYKVPTFCDHCGSLLWGIMRQGLQC KICKMNVHIRCQANVAPNCGVNAVELAKTLAGMGLQPGNISPTSKLVSRSTLRRQGKE SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNH RQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFSYVSPELQ P" BASE COUNT 983 a 858 c 934 g 854 t ORIGIN 1 agcgggaaga gacgcttggg gctggggctc accggacggg taggtccggc tctccaggga 61 gaggagctgc ccggccctgg agaaggggcg agtcctgcgc gagtccccgg gaggcgccgc 121 gcgcttggaa gggacggtcg ggcttccccg gcccgctgag ggctaggcgg cgggctcccc 181 tcctttccac ctcggcaggg agggaaggag gggagggaaa agtcccacgg aggaggcaga 241 atggccagtc gaggggcgct taggcgctgc ctttccccag ggctgcctcg actcctgcac 301 ctgtcccgag ggctggcctg agacgggact cccggttctc ccgctgcgaa gcagcgcggc 361 cccccggggc cggggcagcg gcgccggcat gtcgtctggc accatgaagt tcaatggcta 421 tttgagggtc cgcatcggtg aggcagtggg gctgcagccc acccgctggt ccctgcgcca 481 ctcgctcttc aagaagggcc accagctgct ggacccctat ctgacggtga gcgtggacca 541 ggtgcgcgtg ggccagacca gcaccaagca gaagaccaac aaacccacgt acaacgagga 601 gttttgcgct aacgtcaccg acggcggcca cctcgagttg gccgtcttcc acgagacgcc 661 cctgggctac gaccacttcg tggccaactg caccctgcag ttccaggagc tgctgcgcac 721 gaccggcgcc tcggacacct tcgagggttg ggtggatctc gagccagagg ggaaagtatt 781 cgtggtaata acccttaccg ggagtttcac tgaagctact ctccagagag accggatctt 841 caaacatttt accaggaagc gccaaagggc tatgcgaagg cgagtccacc agatcaatgg 901 acacaagttc atggccacgt atctgaggca gcccacctac tgctctcact gcagggagtt 961 tatctgggga gtgtttggga aacagggtta tcagtgccaa gtgtgcacct gtgtcgtcca 1021 taaacgctgc catcatctaa ttgttacagc ctgtacttgc caaaacaata ttaacaaagt 1081 ggattcaaag attgcagaac agaggttcgg gatcaacatc ccacacaagt tcagcatcca 1141 caactacaaa gtgccaacat tctgcgatca ctgtggctca ctgctctggg gaataatgcg 1201 acaaggactt cagtgtaaaa tatgtaaaat gaatgtgcat attcgatgtc aagcgaacgt 1261 ggcccctaac tgtggggtaa atgcggtgga acttgccaag accctggcag ggatgggtct 1321 ccaacccgga aatatttctc caacctcgaa actcgtttcc agatcgaccc taagacgaca 1381 gggaaaggag agcagcaaag aaggaaatgg gattggggtt aattcttcca accgacttgg 1441 tatcgacaac tttgagttca tccgagtgtt ggggaagggg agttttggga aggtgatgct 1501 tgcaagagta aaagaaacag gagacctcta tgctgtgaag gtgctgaaga aggacgtgat 1561 tctgcaggat gatgatgtgg aatgcaccat gaccgagaaa aggatcctgt ctctggcccg 1621 caatcacccc ttcctcactc agttgttctg ctgctttcag acccccgatc gtctgttttt 1681 tgtgatggag tttgtgaatg ggggtgactt gatgttccac attcagaagt ctcgtcgttt 1741 tgatgaagca cgagctcgct tctatgctgc agaaatcatt tcggctctca tgttcctcca 1801 tgataaagga atcatctata gagatctgaa actggacaat gtcctgttgg accacgaggg 1861 tcactgtaaa ctggcagact tcggaatgtg caaggagggg atttgcaatg gtgtcaccac 1921 ggccacattc tgtggcacgc cagactatat cgctccagag atcctccagg aaatgctgta 1981 cgggcctgca gtagactggt gggcaatggg cgtgttgctc tatgagatgc tctgtggtca 2041 cgcgcctttt gaggcagaga atgaagatga cctctttgag gccatactga atgatgaggt 2101 ggtctaccct acctggctcc atgaagatgc cacagggatc ctaaaatctt tcatgaccaa 2161 gaaccccacc atgcgcttgg gcagcctgac tcagggaggc gagcacgcca tcttgagaca 2221 tccttttttt aaggaaatcg actgggccca gctgaaccat cgccaaatag aaccgccttt 2281 cagacccaga atcaaatccc gagaagatgt cagtaatttt gaccctgact tcataaagga 2341 agagccagtt ttaactccaa ttgatgaggg acatcttcca atgattaacc aggatgagtt 2401 tagaaacttt tcctatgtgt ctccagaatt gcaaccatag ccttatgggg agtgagagag 2461 agggcacgag aacccaaagg gaatagagat tctccaggaa tttcctctat gggaccttcc 2521 cagcatcagc cttagaacaa gaaccttacc ttcaaggagc aagtgaagaa ctctgtgaag 2581 gatggaactt tcagatatca actatttaga gtccagaggg agccatggca ctagaaatag 2641 ttgataatga aatgagattt tatgaagtat accgctccac ctatgagcgt ctgtctctgt 2701 gggcttggga tgttaacagg agccaaaagg agggaaagtg tgaagaataa agtagatctg 2761 agaaattctg agccaatcag gcttcttaat tcaagagaca aaccaagacg ttctgtcaac 2821 tgtgctgtgc tcttctttaa gccaatgaac cccaattcct ggcagtctac aagaagtctc 2881 ttaatgctaa tgaagaattt aaaggtcttt ttaaggaaat gaagggcttt ccaaatagaa 2941 tgatttactc tgaagaaaca aacaatggta tctctgaaac tcacaaccta aagcccaatc 3001 ttgaaaatat gttgtgcacc aagacgactg cttcagcttc ttctcttatc cttactttct 3061 ttaatagata tttattaaac tgtccagtga aaaggtgcca caatgcccag tattgtaaac 3121 aacaggtttg cattcatgaa gctttcattc attctggagt ctactaattt acctgaatgg 3181 tgtttgcatt ctgtgaaatg cctctccacg ttgcatatgt cacacttttg tctgcacata 3241 actctttttt cacaagaagg gtcactgcca caacagcaca gtcagcgggt gaattacagg 3301 tgcctgctgc ctgcctacct gggtaatctg atcttgtctg tatcgccgtg tgctcatcac 3361 tgaagaattg caggccactc atgtcagtga ccagatttgt ggcttataaa cattagcagt 3421 ttatttatgt tttaagatgc aaagatgtgt gtttgatatt cactttaata attagaaatg 3481 gatcttgtaa acagggcata tatcaaagat gaccttataa tatgtacccg aatatacagt 3541 tcaagaattt tgtctgactg gaaataaatg cattttgtag caaaaaaaaa aaaaaaaaaa 3601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //