LOCUS BC037268 3629 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens protein kinase C, eta, mRNA (cDNA clone MGC:26269
IMAGE:4822159), complete cds.
ACCESSION BC037268
VERSION BC037268.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3629)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3629)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47717140.
FEATURES Location/Qualifiers
source 1..3629
/db_xref="H-InvDB:HIT000051874"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26269 IMAGE:4822159"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3629
/gene="PRKCH"
/gene_synonym="MGC26269"
/gene_synonym="MGC5363"
/gene_synonym="nPKC-eta"
/gene_synonym="PKC-L"
/gene_synonym="PKCL"
/db_xref="GeneID:5583"
/db_xref="HGNC:HGNC:9403"
/db_xref="MIM:605437"
CDS 389..2440
/gene="PRKCH"
/gene_synonym="MGC26269"
/gene_synonym="MGC5363"
/gene_synonym="nPKC-eta"
/gene_synonym="PKC-L"
/gene_synonym="PKCL"
/codon_start=1
/product="protein kinase C, eta"
/protein_id="AAH37268.1"
/db_xref="GeneID:5583"
/db_xref="HGNC:HGNC:9403"
/db_xref="MIM:605437"
/translation="MSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPY
LTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDGGHLELAVFHETPLGYDHFVANCT
LQFQELLRTTGASDTFEGWVDLEPEGKVFVVITLTGSFTEATLQRDRIFKHFTRKRQR
AMRRRVHQINGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLI
VTACTCQNNINKVDSKIAEQRFGINIPHKFSIHNYKVPTFCDHCGSLLWGIMRQGLQC
KICKMNVHIRCQANVAPNCGVNAVELAKTLAGMGLQPGNISPTSKLVSRSTLRRQGKE
SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL
QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR
FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG
VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI
LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNH
RQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFSYVSPELQ
P"
BASE COUNT 983 a 858 c 934 g 854 t
ORIGIN
1 agcgggaaga gacgcttggg gctggggctc accggacggg taggtccggc tctccaggga
61 gaggagctgc ccggccctgg agaaggggcg agtcctgcgc gagtccccgg gaggcgccgc
121 gcgcttggaa gggacggtcg ggcttccccg gcccgctgag ggctaggcgg cgggctcccc
181 tcctttccac ctcggcaggg agggaaggag gggagggaaa agtcccacgg aggaggcaga
241 atggccagtc gaggggcgct taggcgctgc ctttccccag ggctgcctcg actcctgcac
301 ctgtcccgag ggctggcctg agacgggact cccggttctc ccgctgcgaa gcagcgcggc
361 cccccggggc cggggcagcg gcgccggcat gtcgtctggc accatgaagt tcaatggcta
421 tttgagggtc cgcatcggtg aggcagtggg gctgcagccc acccgctggt ccctgcgcca
481 ctcgctcttc aagaagggcc accagctgct ggacccctat ctgacggtga gcgtggacca
541 ggtgcgcgtg ggccagacca gcaccaagca gaagaccaac aaacccacgt acaacgagga
601 gttttgcgct aacgtcaccg acggcggcca cctcgagttg gccgtcttcc acgagacgcc
661 cctgggctac gaccacttcg tggccaactg caccctgcag ttccaggagc tgctgcgcac
721 gaccggcgcc tcggacacct tcgagggttg ggtggatctc gagccagagg ggaaagtatt
781 cgtggtaata acccttaccg ggagtttcac tgaagctact ctccagagag accggatctt
841 caaacatttt accaggaagc gccaaagggc tatgcgaagg cgagtccacc agatcaatgg
901 acacaagttc atggccacgt atctgaggca gcccacctac tgctctcact gcagggagtt
961 tatctgggga gtgtttggga aacagggtta tcagtgccaa gtgtgcacct gtgtcgtcca
1021 taaacgctgc catcatctaa ttgttacagc ctgtacttgc caaaacaata ttaacaaagt
1081 ggattcaaag attgcagaac agaggttcgg gatcaacatc ccacacaagt tcagcatcca
1141 caactacaaa gtgccaacat tctgcgatca ctgtggctca ctgctctggg gaataatgcg
1201 acaaggactt cagtgtaaaa tatgtaaaat gaatgtgcat attcgatgtc aagcgaacgt
1261 ggcccctaac tgtggggtaa atgcggtgga acttgccaag accctggcag ggatgggtct
1321 ccaacccgga aatatttctc caacctcgaa actcgtttcc agatcgaccc taagacgaca
1381 gggaaaggag agcagcaaag aaggaaatgg gattggggtt aattcttcca accgacttgg
1441 tatcgacaac tttgagttca tccgagtgtt ggggaagggg agttttggga aggtgatgct
1501 tgcaagagta aaagaaacag gagacctcta tgctgtgaag gtgctgaaga aggacgtgat
1561 tctgcaggat gatgatgtgg aatgcaccat gaccgagaaa aggatcctgt ctctggcccg
1621 caatcacccc ttcctcactc agttgttctg ctgctttcag acccccgatc gtctgttttt
1681 tgtgatggag tttgtgaatg ggggtgactt gatgttccac attcagaagt ctcgtcgttt
1741 tgatgaagca cgagctcgct tctatgctgc agaaatcatt tcggctctca tgttcctcca
1801 tgataaagga atcatctata gagatctgaa actggacaat gtcctgttgg accacgaggg
1861 tcactgtaaa ctggcagact tcggaatgtg caaggagggg atttgcaatg gtgtcaccac
1921 ggccacattc tgtggcacgc cagactatat cgctccagag atcctccagg aaatgctgta
1981 cgggcctgca gtagactggt gggcaatggg cgtgttgctc tatgagatgc tctgtggtca
2041 cgcgcctttt gaggcagaga atgaagatga cctctttgag gccatactga atgatgaggt
2101 ggtctaccct acctggctcc atgaagatgc cacagggatc ctaaaatctt tcatgaccaa
2161 gaaccccacc atgcgcttgg gcagcctgac tcagggaggc gagcacgcca tcttgagaca
2221 tccttttttt aaggaaatcg actgggccca gctgaaccat cgccaaatag aaccgccttt
2281 cagacccaga atcaaatccc gagaagatgt cagtaatttt gaccctgact tcataaagga
2341 agagccagtt ttaactccaa ttgatgaggg acatcttcca atgattaacc aggatgagtt
2401 tagaaacttt tcctatgtgt ctccagaatt gcaaccatag ccttatgggg agtgagagag
2461 agggcacgag aacccaaagg gaatagagat tctccaggaa tttcctctat gggaccttcc
2521 cagcatcagc cttagaacaa gaaccttacc ttcaaggagc aagtgaagaa ctctgtgaag
2581 gatggaactt tcagatatca actatttaga gtccagaggg agccatggca ctagaaatag
2641 ttgataatga aatgagattt tatgaagtat accgctccac ctatgagcgt ctgtctctgt
2701 gggcttggga tgttaacagg agccaaaagg agggaaagtg tgaagaataa agtagatctg
2761 agaaattctg agccaatcag gcttcttaat tcaagagaca aaccaagacg ttctgtcaac
2821 tgtgctgtgc tcttctttaa gccaatgaac cccaattcct ggcagtctac aagaagtctc
2881 ttaatgctaa tgaagaattt aaaggtcttt ttaaggaaat gaagggcttt ccaaatagaa
2941 tgatttactc tgaagaaaca aacaatggta tctctgaaac tcacaaccta aagcccaatc
3001 ttgaaaatat gttgtgcacc aagacgactg cttcagcttc ttctcttatc cttactttct
3061 ttaatagata tttattaaac tgtccagtga aaaggtgcca caatgcccag tattgtaaac
3121 aacaggtttg cattcatgaa gctttcattc attctggagt ctactaattt acctgaatgg
3181 tgtttgcatt ctgtgaaatg cctctccacg ttgcatatgt cacacttttg tctgcacata
3241 actctttttt cacaagaagg gtcactgcca caacagcaca gtcagcgggt gaattacagg
3301 tgcctgctgc ctgcctacct gggtaatctg atcttgtctg tatcgccgtg tgctcatcac
3361 tgaagaattg caggccactc atgtcagtga ccagatttgt ggcttataaa cattagcagt
3421 ttatttatgt tttaagatgc aaagatgtgt gtttgatatt cactttaata attagaaatg
3481 gatcttgtaa acagggcata tatcaaagat gaccttataa tatgtacccg aatatacagt
3541 tcaagaattt tgtctgactg gaaataaatg cattttgtag caaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//