LOCUS BC036653 4270 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens poly(A) polymerase beta (testis specific), mRNA (cDNA clone MGC:32994 IMAGE:5269035), complete cds. ACCESSION BC036653 VERSION BC036653.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4270) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4270) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC036653.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: o Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37202113. FEATURES Location/Qualifiers source 1..4270 /db_xref="H-InvDB:HIT000051752" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32994 IMAGE:5269035" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4270 /gene="PAPOLB" /gene_synonym="PAPT" /gene_synonym="TPAP" /db_xref="GeneID:56903" /db_xref="HGNC:HGNC:15970" /db_xref="MIM:607436" CDS 185..2098 /gene="PAPOLB" /gene_synonym="PAPT" /gene_synonym="TPAP" /codon_start=1 /product="poly(A) polymerase beta (testis specific)" /protein_id="AAH36653.2" /db_xref="GeneID:56903" /db_xref="HGNC:HGNC:15970" /db_xref="MIM:607436" /translation="MMPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLI ETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFG SYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKL CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNI DNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSIST RMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWV GLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNS EILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKELHQLLPHHVLQDKKA HSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTAS VANIQATEFSLQQVNTNESSGVALNESIPHAVSQPAISPSPKAMVARVVSSTCLISHP DLQETQQQTYLIL" BASE COUNT 1303 a 849 c 879 g 1239 t ORIGIN 1 atgttggggc tgaggggaag gaggagaagc tcctgaagcg gcgggcgcgc agcgggagtg 61 ggagtggggt cggaccaggg cagctagaag ccctgccctt ccgcctcagc ggatcatgac 121 ccgggcggcg gccgcgaagg tcgcggtggt gggggacgtg ccctggcggg gcgggcgctg 181 aaagatgatg ccgtttccgg tgacaaccca gggaccaccg cagccggcgc cgccgccgaa 241 tcgctacggc gtctcctcgc ctatcagtct agcggtcccc aaggagacgg actgcctcct 301 cacccagagg ctaatagaaa ccctcaggcc cttcggggtc ttcgaagagg aagaggaact 361 gcagcgcagg attttagttt tggacaaatt aaataatctg gtaaaggaat ggatacgcga 421 aatcagtgaa agcaagagtc ttccccagtc tgtaattgaa aacgttggag gaaagatttt 481 tacgtttggc tcttacagat taggagtaca tacgaaaggc gcagatattg acgccttgtg 541 cgttgcacca agtcatgtgg atcgaagcga ctttttcacc tcattctatg ctaaactgaa 601 actacaggag gaagtgaaag atttaagggc tgtccaggag gcatttgtgc cagttatcaa 661 actgtgtttt gatgggatag agattgatat tttatttgca agattagcac tacagactat 721 tccagaagat ttggacttaa gagatgacag tctacttaaa aatttagaca ttagatgcat 781 aagaagcctt aatggttgcc gggtaaccga tgaaatttta catctagtgc caaacattga 841 caacttcagg ctgactctga gagccatcaa actgtgggcc aagtgccaca atatctattc 901 caatatatta ggtttcctcg gaggtgtttc ctgggccatg ctagtagcaa gaacttgtca 961 gctttatcca aatgcagtag cgtcaactct tgtacggaaa ttcttcttgg tattttcaga 1021 atgggaatgg ccaaacccag tgttactgaa ggagcctgaa gaacggaatc ttaatttgcc 1081 tgtatgggac ccaagagtaa atcccagtga taggtaccat cttatgccta tcatcacacc 1141 agcataccca cagcagaact ccacatacaa cgtgtctatt tcaaccagga tggtcatgat 1201 tgaggagttt aaacaggggc ttgctatcac acacgagatt ttgctaagta aggcagagtg 1261 gtccaaactc tttgaagctc caagcttctt tcaaaagtac aagcattata ttgtacttct 1321 ggcaagtgca tcaacagaaa aacaacattt agaatgggtg ggcttggtgg aatcaaagat 1381 ccgaatcctg gttgggagct tggagaagaa tgaatttatt acactggcac atgtgaatcc 1441 acagtcattt ccagcaccca aagaaaatcc tgatatggaa gaatttcgta caatgtgggt 1501 gattgggtta gggctaaaaa agccagataa ttctgaaatt ctcagcattg atctcaccta 1561 tgatatccag tctttcacag atactgttta taggcaagca gtgaatagta agatgtttga 1621 gatgggtatg aaaattactg cagtgcattt aagaagaaag gaacttcacc agctgctgcc 1681 tcatcatgtg cttcaggaca agaaagcaca ctcaacagaa ggtagaagat tgacagattt 1741 gaacgacagc agctttgact tgtctgcagg ctgtgaaaac agcatgtctg tgccttcatc 1801 tactagcact atgaagacag gcccattgat tagcagttct cagggtagaa acagtcctgc 1861 cttggctgta atgacagcat ctgtggctaa catacaggct actgaatttt ccttgcaaca 1921 ggtgaatacc aatgaaagtt caggggttgc attaaacgaa agtattcctc acgctgtctc 1981 tcagcctgcc atttctccat caccaaaggc catggtcgcc agagttgttt cttcaacatg 2041 tctcataagc catccagacc ttcaggaaac tcagcaacaa acatatctaa tcctatagtt 2101 ggagtctaga ggatattctt gcctcataaa gaagaaagga ccaagaaaac caaaacggaa 2161 gaggagaaac tcaatacaaa gacaagtaca actccattag aaaaattcag acagcatctt 2221 ctctattggc ctctcaggga acatcagtat agatctttcc ggtatccctg ttctccctgc 2281 aaatccaatt cctgttatca agaattcagt aaaacaggtt gaatggttaa aaacaacctc 2341 aagggtccat gaacaatatc tgccgactga acctgttgtc ttcaaatact aaggaaggag 2401 aatgaggggt acgggactag gtatgacttg aaatagattg aggctcattt ggtaacttcc 2461 ttactgagcc agtcttgatc agaagtccac attagtatgt gacagctaga ggtactgtta 2521 ttaatgtatc agcaacagtt acattaacta tttcaaagga ctactgccct taaaatgaaa 2581 aaacctttca gctatgtttg tacccgtgac tgacatctgg actggattta tgcttgatgc 2641 attgttggga aaatatgcaa tacaaactgg tatcagaatt ccttatactg atgaggcact 2701 ttatattttt tattagagag tagaactaat tttagatttt tcaaattggt gaattttatt 2761 tttccctgaa gaggtttctt cactattaat cttaaaattg gataccattg tgcagcggtg 2821 tactgtactt cagagaaagc ataaaagtac atctagctca gtccctatga ggtagctgta 2881 accctttaaa atgaaatgtc aactttaagg tatgtttttg acatcaacca ttagtaggtc 2941 tttggttttg atggcacact atggagaaag gacacactgg ttttaatctg tagaactgtt 3001 ttagagtaat tagcaatcaa acattttctt tgagctatca aagctccata ttctcttgtc 3061 ctcaatcatt agtcctaaaa caaaaaagct ttttgcctcc ctctcttctc tttgcctgta 3121 tgcacacagt atgcttatgt gtcatttcac aagaaaaaag gaataatatt ctctaaacca 3181 tgatgtgaaa ctgacaatcc tgtggccaca tggcacaaaa caccaaatat tggttatgat 3241 gaaacaccac attttagcaa aactttacta aatgtaatgt ctatgagata tgtttctgat 3301 cttggatgac catttgatca ctgcatatga gaagttttgt tcattccaca gaatacctcc 3361 ttataggaaa gttaatttcc aattgcacac ataagcaaaa aggcattttc ttcaagaatt 3421 ttaaacactt ttatttttaa acgatttatc aaaattcatc tctaaatttt acatgtagaa 3481 acataaaaaa gtaatttcta gcaagcactt gacatcttac tggctttctg ctcttttagt 3541 ctacaaaaga tcagcaatac tttaagttaa aaaaaatctc ataattaagc agtagagcat 3601 ctatgattag gaaatgtgag gggcaacaga tgtgaatgaa tgaaagttga gtctttctta 3661 atctagacag caaacttaac aggctttcca attagccttg ctttaacccc tcccgtccct 3721 cctctaactc tgcacttttc atgttaaact gcaattactt aaactctttt cctgtcctgc 3781 attaattttc caaagttgga atatagtcat gtccttttat gctgtagaga cttttctttc 3841 accattactt tctgatatct agtacacagt atttcttttt ctcacatctt tgccgtttca 3901 ccacaataat aaatcgggtg aagtgtgcac aatatctgta ttttgaatgg ctatggcgtt 3961 aggttgaaat ggccaggcac aaatttagtc tggtcatttt gtttacacat tgggaaaaaa 4021 attagtttat taaacattac ctgtaactgt gtctgtttta ccaagctgga accttgggac 4081 tttttatttc taatttttat tacctgaatg tcagaccatt ttttcatgtg atgtacctag 4141 tgagtggagt ttgctttgtt ttatggtatc tgtactcctg gtatattcaa gcactgtttt 4201 gaaaacagat gacttatttc tccattaaaa atgcaataaa aataaatggc aaacaaaaaa 4261 aaaaaaaaaa //